RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 DIAPH3Q9NSV4 1193 aa12.95□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
TRAF3IP2-201ENST00000340026 H7C1W4 665 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 MYD88Q99836 296 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 COL14A1Q05707 1796 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 IL2RBP14784 551 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ATP5JP18859 108 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
TRAF3IP2-201ENST00000340026 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ZSWIM6Q9HCJ5 1215 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 WNK3Q9BYP7 1800 aa12.93□□□□□ -0.34
TRAF3IP2-201ENST00000340026 DISP2A7MBM2 1401 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 MYL6BP14649 208 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ZSCAN31Q96LW9 406 aaPredicted RBP12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 LIMCH1Q9UPQ0 1083 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 MBD3O95983 291 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PKP1Q13835 747 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 CCDC191Q8NCU4 936 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 SH2B1Q9NRF2 756 aaPredicted RBP12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 WDR33Q9C0J8 1336 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 HMG20BQ9P0W2 317 aa12.92□□□□□ -0.34
TRAF3IP2-201ENST00000340026 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 NBPF14Q5TI25 921 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 NBPF10Q6P3W6 841 aaKnown RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 NBPF15Q8N660 670 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 TEX13AQ9BXU3 409 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 DDX49Q9Y6V7 483 aaKnown RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 TNNI3KQ59H18 835 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 RASEFQ8IZ41 740 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 FPGT-TNNI3KV9GXZ4 949 aa12.91□□□□□ -0.34
TRAF3IP2-201ENST00000340026 CIAO1O76071 339 aa12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 HSPA2P54652 639 aa12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 FOXO4P98177 505 aa12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
TRAF3IP2-201ENST00000340026 ITGB4P16144 1822 aa12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CWC25Q9NXE8 425 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 A0A087WZG4 1122 aa12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PSMA5P28066 241 aa12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 AK2P54819 239 aa12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PTH1RQ03431 593 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 RNF20Q5VTR2 975 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 HAUS7Q99871 368 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ANKRD1Q15327 319 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 GAS2L3Q86XJ1 694 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
TRAF3IP2-201ENST00000340026 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 IL15P40933 162 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CCDC8Q9H0W5 538 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ZNF335Q9H4Z2 1342 aaPredicted RBP12.87□□□□□ -0.35
TRAF3IP2-201ENST00000340026 KRT32Q14532 448 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ZNF609O15014 1411 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ZSCAN23Q3MJ62 389 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 GPT2Q8TD30 523 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CASTP20810 708 aaKnown RBP12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PDRG1Q9NUG6 133 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
TRAF3IP2-201ENST00000340026 KDM4FA0A1W2PPD8 638 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 SLC27A2O14975 620 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 TFCP2Q12800 502 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms