RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 PNMA6EA0A0J9YXQ4 647 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 CAMKK2Q96RR4 588 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 BCL2L12Q9HB09 334 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
TMC1-202ENST00000340019 COL24A1Q17RW2 1714 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 GPTP24298 496 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 SSFA2P28290 1259 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 POLA2Q14181 598 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 SSH3Q8TE77 659 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 BICC1Q9H694 974 aaKnown RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 DCTPP1Q9H773 170 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 USP42Q9H9J4 1324 aaKnown RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 PCCAP05165 728 aaPredicted RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 RABL6Q3YEC7 729 aaPredicted RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 EPHA10Q5JZY3 1008 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 PPP1R42Q7Z4L9 355 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 ZBTB38Q8NAP3 1195 aaPredicted RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 JARID2Q92833 1246 aaPredicted RBP9.78□□□□□ -0.84
TMC1-202ENST00000340019 GCC1Q96CN9 775 aa9.78□□□□□ -0.84
TMC1-202ENST00000340019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.77□□□□□ -0.84
TMC1-202ENST00000340019 HMMRO75330 724 aa9.77□□□□□ -0.84
TMC1-202ENST00000340019 ZNF827Q17R98 1081 aa9.77□□□□□ -0.84
TMC1-202ENST00000340019 USPL1Q5W0Q7 1092 aa9.77□□□□□ -0.84
TMC1-202ENST00000340019 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.84
TMC1-202ENST00000340019 PHF14O94880 888 aa9.77□□□□□ -0.85
TMC1-202ENST00000340019 EN1Q05925 392 aaPredicted RBP9.77□□□□□ -0.85
TMC1-202ENST00000340019 EZH2Q15910 746 aaKnown RBP9.77□□□□□ -0.85
TMC1-202ENST00000340019 MYH3P11055 1940 aa9.77□□□□□ -0.85
TMC1-202ENST00000340019 RFC4P35249 363 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 FOXO4P98177 505 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 PARP10Q53GL7 1025 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 PLA2G12BQ9BX93 195 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 CDHR2Q9BYE9 1310 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 LAMB2P55268 1798 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 DDX60Q8IY21 1712 aaKnown RBP9.76□□□□□ -0.85
TMC1-202ENST00000340019 SRGAP3O43295 1099 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 ZPR1O75312 459 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 SUSD4Q5VX71 490 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 FAM89AQ96GI7 184 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 NIP7Q9Y221 180 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMC1-202ENST00000340019 QSER1Q2KHR3 1735 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
TMC1-202ENST00000340019 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
TMC1-202ENST00000340019 NUCB1Q02818 461 aa9.75□□□□□ -0.85
TMC1-202ENST00000340019 SKAP1Q86WV1 359 aa9.75□□□□□ -0.85
TMC1-202ENST00000340019 NTSR2O95665 410 aa9.75□□□□□ -0.85
TMC1-202ENST00000340019 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
TMC1-202ENST00000340019 SYNE4Q8N205 404 aa9.75□□□□□ -0.85
TMC1-202ENST00000340019 TRMT112Q9UI30 125 aaKnown RBP9.75□□□□□ -0.85
TMC1-202ENST00000340019 BAG6P46379 1132 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
TMC1-202ENST00000340019 UTP14AQ9BVJ6 771 aaKnown RBP9.74□□□□□ -0.85
TMC1-202ENST00000340019 TFCP2L1Q9NZI6 479 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 NOP58Q9Y2X3 529 aaKnown RBP9.74□□□□□ -0.85
TMC1-202ENST00000340019 CASZ1Q86V15 1759 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 GYS1P13807 737 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 RFX5P48382 616 aaPredicted RBP9.74□□□□□ -0.85
TMC1-202ENST00000340019 DEFB132Q7Z7B7 95 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 SH3TC1Q8TE82 1336 aa9.74□□□□□ -0.85
TMC1-202ENST00000340019 IRS4O14654 1257 aaPredicted RBP9.73□□□□□ -0.85
TMC1-202ENST00000340019 CSF1RP07333 972 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 LMBR1LQ6UX01 489 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 CHD1LQ86WJ1 897 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 ANO8Q9HCE9 1232 aaPredicted RBP9.73□□□□□ -0.85
TMC1-202ENST00000340019 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 ANKRD45Q5TZF3 282 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 PNPLA7Q6ZV29 1317 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 COL23A1Q86Y22 540 aaPredicted RBP9.73□□□□□ -0.85
TMC1-202ENST00000340019 FLAD1Q8NFF5 587 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 SETDB2Q96T68 719 aa9.73□□□□□ -0.85
TMC1-202ENST00000340019 PDE8AO60658 829 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 SURF6O75683 361 aaKnown RBP9.72□□□□□ -0.85
TMC1-202ENST00000340019 PDE4AP27815 886 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 NFIXQ14938 502 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 SLC15A2Q16348 729 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 BICDL1Q6ZP65 573 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 COPRSQ9NQ92 184 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 CARMIL3Q8ND23 1372 aa9.72□□□□□ -0.85
TMC1-202ENST00000340019 CTSWP56202 376 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 PTPN12Q05209 780 aaKnown RBP9.71□□□□□ -0.85
TMC1-202ENST00000340019 NUTM1Q86Y26 1132 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 TTLL11Q8NHH1 800 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 PA2G4Q9UQ80 394 aaKnown RBP9.71□□□□□ -0.85
TMC1-202ENST00000340019 FAM177BA6PVY3 158 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 RAB11FIP3O75154 756 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 TM4SF1P30408 202 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 LNPKQ9C0E8 428 aa9.71□□□□□ -0.85
TMC1-202ENST00000340019 SLC10A5Q5PT55 438 aa9.71□□□□□ -0.86
TMC1-202ENST00000340019 NYXQ9GZU5 481 aa9.71□□□□□ -0.86
TMC1-202ENST00000340019 HCLS1P14317 486 aaPredicted RBP9.7□□□□□ -0.86
TMC1-202ENST00000340019 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 HSP90AB4PQ58FF6 505 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 LRRCC1Q9C099 1032 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 ABCC12Q96J65 1359 aa9.7□□□□□ -0.86
TMC1-202ENST00000340019 NRXN2Q9P2S2 1712 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms