RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DDX21Q9NR30 783 aaKnown RBP eCLIP19.8■□□□□ 0.76
LITAF-201ENST00000339430 CWF19L2Q2TBE0 894 aaKnown RBP19.79■□□□□ 0.76
LITAF-201ENST00000339430 C9orf78Q9NZ63 289 aaPredicted RBP19.79■□□□□ 0.76
LITAF-201ENST00000339430 PIP4K2AP48426 406 aaPredicted RBP19.79■□□□□ 0.76
LITAF-201ENST00000339430 HYPKQ9NX55 129 aa19.79■□□□□ 0.76
LITAF-201ENST00000339430 THSD7AQ9UPZ6 1657 aa19.79■□□□□ 0.76
LITAF-201ENST00000339430 MYL6BP14649 208 aa19.78■□□□□ 0.76
LITAF-201ENST00000339430 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
LITAF-201ENST00000339430 ISY1Q9ULR0 285 aaKnown RBP19.78■□□□□ 0.76
LITAF-201ENST00000339430 AIMP1Q12904 312 aaKnown RBP19.78■□□□□ 0.76
LITAF-201ENST00000339430 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.78■□□□□ 0.76
LITAF-201ENST00000339430 ANAPC15P60006 121 aa19.77■□□□□ 0.76
LITAF-201ENST00000339430 PA2G4Q9UQ80 394 aaKnown RBP19.77■□□□□ 0.76
LITAF-201ENST00000339430 PRPF40AO75400 957 aaKnown RBP19.77■□□□□ 0.75
LITAF-201ENST00000339430 CAVIN1Q6NZI2 390 aaKnown RBP19.76■□□□□ 0.75
LITAF-201ENST00000339430 KSR2Q6VAB6 950 aa19.76■□□□□ 0.75
LITAF-201ENST00000339430 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
LITAF-201ENST00000339430 KCNQ2O43526 872 aa19.76■□□□□ 0.75
LITAF-201ENST00000339430 FAM182BQ5T319 152 aa19.76■□□□□ 0.75
LITAF-201ENST00000339430 LAMB4A4D0S4 1761 aa19.76■□□□□ 0.75
LITAF-201ENST00000339430 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
LITAF-201ENST00000339430 MCM2P49736 904 aa19.75■□□□□ 0.75
LITAF-201ENST00000339430 CNTROBQ8N137 903 aa19.75■□□□□ 0.75
LITAF-201ENST00000339430 SEPT12Q8IYM1 358 aa19.75■□□□□ 0.75
LITAF-201ENST00000339430 HSP90AB4PQ58FF6 505 aa19.74■□□□□ 0.75
LITAF-201ENST00000339430 CWC27Q6UX04 472 aaKnown RBP19.74■□□□□ 0.75
LITAF-201ENST00000339430 SGSM2O43147 1006 aa19.73■□□□□ 0.75
LITAF-201ENST00000339430 HSPA4P34932 840 aa19.73■□□□□ 0.75
LITAF-201ENST00000339430 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
LITAF-201ENST00000339430 A1BGP04217 495 aa19.73■□□□□ 0.75
LITAF-201ENST00000339430 DNAJC10Q8IXB1 793 aa19.73■□□□□ 0.75
LITAF-201ENST00000339430 NBPF26B4DH59 902 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 ALDH1L1O75891 902 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 CUL4AQ13619 759 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 NBPF14Q5TI25 921 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 NBPF10Q6P3W6 841 aaKnown RBP19.72■□□□□ 0.75
LITAF-201ENST00000339430 COPS6Q7L5N1 327 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 LRP10Q7Z4F1 713 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 NBPF15Q8N660 670 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 XAGE3Q8WTP9 111 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 SLC4A9Q96Q91 983 aa19.72■□□□□ 0.75
LITAF-201ENST00000339430 CLASRPQ8N2M8 674 aaKnown RBP19.72■□□□□ 0.75
LITAF-201ENST00000339430 MTX1Q13505 466 aa19.71■□□□□ 0.75
LITAF-201ENST00000339430 GPT2Q8TD30 523 aa19.71■□□□□ 0.75
LITAF-201ENST00000339430 RAD50Q92878 1312 aa19.71■□□□□ 0.75
LITAF-201ENST00000339430 RBM27Q9P2N5 1060 aaKnown RBP19.71■□□□□ 0.75
LITAF-201ENST00000339430 DDX58O95786 925 aaKnown RBP19.71■□□□□ 0.75
LITAF-201ENST00000339430 SUCLG2Q96I99 432 aa19.71■□□□□ 0.75
LITAF-201ENST00000339430 TEX13AQ9BXU3 409 aaPredicted RBP19.71■□□□□ 0.75
LITAF-201ENST00000339430 ERBB4Q15303 1308 aa19.7■□□□□ 0.74
LITAF-201ENST00000339430 ZSCAN23Q3MJ62 389 aa19.7■□□□□ 0.74
LITAF-201ENST00000339430 FBXO41Q8TF61 875 aa19.7■□□□□ 0.74
LITAF-201ENST00000339430 LSG1Q9H089 658 aaKnown RBP19.7■□□□□ 0.74
LITAF-201ENST00000339430 GLRX3O76003 335 aaKnown RBP19.7■□□□□ 0.74
LITAF-201ENST00000339430 FOXD4L6Q3SYB3 417 aaPredicted RBP19.7■□□□□ 0.74
LITAF-201ENST00000339430 FOXD4L3Q6VB84 417 aaPredicted RBP19.7■□□□□ 0.74
LITAF-201ENST00000339430 LARP6Q9BRS8 491 aaKnown RBP19.7■□□□□ 0.74
LITAF-201ENST00000339430 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
LITAF-201ENST00000339430 TTC41PQ6P2S7 1318 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 GRM8O00222 908 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 PTF1AQ7RTS3 328 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 KAZALD1Q96I82 304 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
LITAF-201ENST00000339430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.69■□□□□ 0.74
LITAF-201ENST00000339430 IFIT2P09913 472 aaKnown RBP19.69■□□□□ 0.74
LITAF-201ENST00000339430 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
LITAF-201ENST00000339430 KIAA1211Q6ZU35 1233 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 RIC3Q7Z5B4 369 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 RASEFQ8IZ41 740 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 LINS1Q8NG48 757 aa19.69■□□□□ 0.74
LITAF-201ENST00000339430 BRD1O95696 1058 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 STARD3NLO95772 234 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 AACSQ86V21 672 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 IL17RAQ96F46 866 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 DIAPH3Q9NSV4 1193 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 NSFL1CQ9UNZ2 370 aaKnown RBP19.68■□□□□ 0.74
LITAF-201ENST00000339430 USP42Q9H9J4 1324 aaKnown RBP19.68■□□□□ 0.74
LITAF-201ENST00000339430 NASPP49321 788 aaPredicted RBP19.68■□□□□ 0.74
LITAF-201ENST00000339430 INTS4Q96HW7 963 aaKnown RBP19.68■□□□□ 0.74
LITAF-201ENST00000339430 ECHDC1Q9NTX5 307 aa19.68■□□□□ 0.74
LITAF-201ENST00000339430 ANKRD13DQ6ZTN6 518 aa19.67■□□□□ 0.74
LITAF-201ENST00000339430 SIL1Q9H173 461 aa19.67■□□□□ 0.74
LITAF-201ENST00000339430 PALLDQ8WX93 1383 aa19.67■□□□□ 0.74
LITAF-201ENST00000339430 CPA1P15085 419 aa19.66■□□□□ 0.74
LITAF-201ENST00000339430 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
LITAF-201ENST00000339430 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
LITAF-201ENST00000339430 ZNF445P59923 1031 aa19.66■□□□□ 0.74
LITAF-201ENST00000339430 KLHDC4Q8TBB5 520 aa19.66■□□□□ 0.74
LITAF-201ENST00000339430 LOC102724428A0A0B4J2F2 783 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 EPB41L2O43491 1005 aaKnown RBP19.65■□□□□ 0.74
LITAF-201ENST00000339430 SASH1O94885 1247 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 ATP6V1AP38606 617 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 SIK1P57059 783 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 ERC1Q8IUD2 1116 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 TRIM44Q96DX7 344 aaPredicted RBP19.65■□□□□ 0.74
LITAF-201ENST00000339430 CCDC8Q9H0W5 538 aaPredicted RBP19.65■□□□□ 0.74
LITAF-201ENST00000339430 ZNF330Q9Y3S2 320 aaPredicted RBP19.65■□□□□ 0.74
LITAF-201ENST00000339430 PTH1RQ03431 593 aa19.65■□□□□ 0.74
LITAF-201ENST00000339430 SMARCC1Q92922 1105 aaPredicted RBP19.65■□□□□ 0.74
LITAF-201ENST00000339430 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms