RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 COL14A1Q05707 1796 aaKnown RBP9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 UBR2Q8IWV8 1755 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 CHGBP05060 677 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 IFIT2P09913 472 aaKnown RBP9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
SRFBP1-201ENST00000339397 TFCP2Q12800 502 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 HSP90AB4PQ58FF6 505 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 BOLA2Q9H3K6 86 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 ANO2Q9NQ90 1003 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 SPATA31A5Q5VU36 1347 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 SPATA31A7Q8IWB4 1347 aa9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 RABL6Q3YEC7 729 aaPredicted RBP9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 CWC27Q6UX04 472 aaKnown RBP9.05□□□□□ -0.96
SRFBP1-201ENST00000339397 ITGB4P16144 1822 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 ARFGEF2Q9Y6D5 1785 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 ERBB4Q15303 1308 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 STARD3NLO95772 234 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 LRRC24Q50LG9 513 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 CASC1Q6TDU7 716 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 HSCBQ8IWL3 235 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 PUS3Q9BZE2 481 aaKnown RBP9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 COL22A1Q8NFW1 1626 aaPredicted RBP9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 COPRSQ9NQ92 184 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
SRFBP1-201ENST00000339397 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 CCDC191Q8NCU4 936 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 ISCA1Q9BUE6 129 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 PAPPAQ13219 1627 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 REC8O95072 547 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 TIMM10P62072 90 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 ITPK1Q13572 414 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 SNX21Q969T3 373 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 HDAC5Q9UQL6 1122 aa9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
SRFBP1-201ENST00000339397 FAM177BA6PVY3 158 aa9.02□□□□□ -0.96
SRFBP1-201ENST00000339397 SOCS7O14512 581 aa9.02□□□□□ -0.96
SRFBP1-201ENST00000339397 GLRX3O76003 335 aaKnown RBP9.02□□□□□ -0.96
SRFBP1-201ENST00000339397 ATP6V1AP38606 617 aa9.02□□□□□ -0.96
SRFBP1-201ENST00000339397 ATG9AQ7Z3C6 839 aa9.02□□□□□ -0.96
SRFBP1-201ENST00000339397 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 LAMB4A4D0S4 1761 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 SLFNL1Q499Z3 407 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 ERC1Q8IUD2 1116 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 FAM227BQ96M60 508 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 DBNDD2Q9BQY9 259 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 PLCH1Q4KWH8 1693 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 AOX1Q06278 1338 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 USP42Q9H9J4 1324 aaKnown RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 COL9A3Q14050 684 aaPredicted RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 TNNI3KQ59H18 835 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 CNTROBQ8N137 903 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 TEX13AQ9BXU3 409 aaPredicted RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 FPGT-TNNI3KV9GXZ4 949 aa9.02□□□□□ -0.97
SRFBP1-201ENST00000339397 SLIT2O94813 1529 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 TTC41PQ6P2S7 1318 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 MAP3K15Q6ZN16 1313 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 SGSM2O43147 1006 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 SIK1P57059 783 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 PTH1RQ03431 593 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 THRAP3Q9Y2W1 955 aaKnown RBP9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 K7ELQ4 463 aaPredicted RBP9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 DTNBO60941 627 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
SRFBP1-201ENST00000339397 CRKLP46109 303 aaKnown RBP9□□□□□ -0.97
SRFBP1-201ENST00000339397 NEK4P51957 841 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 NLRP10Q86W26 655 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
SRFBP1-201ENST00000339397 NEUROD6Q96NK8 337 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 CPA1P15085 419 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 DDIT3P35638 169 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 RABEP1Q15276 862 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 BARGINQ6ZT62 677 aa9□□□□□ -0.97
SRFBP1-201ENST00000339397 NUP188Q5SRE5 1749 aa8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 NRAPQ86VF7 1730 aa8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 CDCA7Q9BWT1 371 aaPredicted RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 LSG1Q9H089 658 aaKnown RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 A0A0D9SFI3 127 aa8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 HSP90AA1P07900 732 aaKnown RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 ZBTB38Q8NAP3 1195 aaPredicted RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 DNAJC2Q99543 621 aaKnown RBP8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 GREM2Q9H772 168 aa8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 USP21Q9UK80 565 aa8.99□□□□□ -0.97
SRFBP1-201ENST00000339397 HSPA1LP34931 641 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 EIF5P55010 431 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 NMIQ13287 307 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 PKP1Q13835 747 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms