RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 HSP90AB3PQ58FF7 597 aa32.08■■■□□ 2.73
ATF4-201ENST00000337304 MX1P20591 662 aa32.07■■■□□ 2.72
ATF4-201ENST00000337304 TUBGCP6Q96RT7 1819 aa32.06■■■□□ 2.72
ATF4-201ENST00000337304 ERC1Q8IUD2 1116 aa32.06■■■□□ 2.72
ATF4-201ENST00000337304 RFX5P48382 616 aaPredicted RBP32.05■■■□□ 2.72
ATF4-201ENST00000337304 LINC00116Q8NCU8 138 aa32.05■■■□□ 2.72
ATF4-201ENST00000337304 STAP2Q9UGK3 403 aa32.05■■■□□ 2.72
ATF4-201ENST00000337304 BRWD3Q6RI45 1802 aa32.05■■■□□ 2.72
ATF4-201ENST00000337304 LMBR1LQ6UX01 489 aa32.04■■■□□ 2.72
ATF4-201ENST00000337304 KLHDC4Q8TBB5 520 aa32.04■■■□□ 2.72
ATF4-201ENST00000337304 G3BP1Q13283 466 aaKnown RBP eCLIP32.04■■■□□ 2.72
ATF4-201ENST00000337304 PCCAP05165 728 aaPredicted RBP32.03■■■□□ 2.72
ATF4-201ENST00000337304 GPTP24298 496 aa32.03■■■□□ 2.72
ATF4-201ENST00000337304 NLRP10Q86W26 655 aa32.03■■■□□ 2.72
ATF4-201ENST00000337304 COPRSQ9NQ92 184 aa32.03■■■□□ 2.72
ATF4-201ENST00000337304 LY75O60449 1722 aa32.03■■■□□ 2.72
ATF4-201ENST00000337304 KCNQ4P56696 695 aa32.02■■■□□ 2.72
ATF4-201ENST00000337304 TSHZ3Q63HK5 1081 aa32.02■■■□□ 2.72
ATF4-201ENST00000337304 NUTM1Q86Y26 1132 aa32.02■■■□□ 2.72
ATF4-201ENST00000337304 PTPN12Q05209 780 aaKnown RBP32.02■■■□□ 2.72
ATF4-201ENST00000337304 SASH1O94885 1247 aa32.01■■■□□ 2.71
ATF4-201ENST00000337304 SDSP20132 328 aa32.01■■■□□ 2.71
ATF4-201ENST00000337304 ZBTB38Q8NAP3 1195 aaPredicted RBP32.01■■■□□ 2.71
ATF4-201ENST00000337304 SIL1Q9H173 461 aa32.01■■■□□ 2.71
ATF4-201ENST00000337304 CDC45O75419 566 aa32■■■□□ 2.71
ATF4-201ENST00000337304 TBC1D9Q6ZT07 1266 aa32■■■□□ 2.71
ATF4-201ENST00000337304 UPF2Q9HAU5 1272 aaKnown RBP32■■■□□ 2.71
ATF4-201ENST00000337304 AOX1Q06278 1338 aa32■■■□□ 2.71
ATF4-201ENST00000337304 FAM89AQ96GI7 184 aa31.99■■■□□ 2.71
ATF4-201ENST00000337304 ZNF34Q8IZ26 560 aa31.99■■■□□ 2.71
ATF4-201ENST00000337304 CLASRPQ8N2M8 674 aaKnown RBP31.99■■■□□ 2.71
ATF4-201ENST00000337304 CNTNAP4Q9C0A0 1308 aa31.98■■■□□ 2.71
ATF4-201ENST00000337304 CAMTA2O94983 1202 aa31.98■■■□□ 2.71
ATF4-201ENST00000337304 IPO9Q96P70 1041 aaKnown RBP31.98■■■□□ 2.71
ATF4-201ENST00000337304 MFAP1P55081 439 aaKnown RBP31.97■■■□□ 2.71
ATF4-201ENST00000337304 BCORQ6W2J9 1755 aa31.97■■■□□ 2.71
ATF4-201ENST00000337304 PLA2G12BQ9BX93 195 aa31.97■■■□□ 2.71
ATF4-201ENST00000337304 CHMP3Q9Y3E7 222 aa31.97■■■□□ 2.71
ATF4-201ENST00000337304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.97■■■□□ 2.71
ATF4-201ENST00000337304 TAF1LQ8IZX4 1826 aa31.97■■■□□ 2.71
ATF4-201ENST00000337304 UBN2Q6ZU65 1347 aa31.97■■■□□ 2.71
ATF4-201ENST00000337304 CDHR2Q9BYE9 1310 aa31.96■■■□□ 2.71
ATF4-201ENST00000337304 BCL11BQ9C0K0 894 aaPredicted RBP31.95■■■□□ 2.71
ATF4-201ENST00000337304 ZNF772Q68DY9 489 aaPredicted RBP31.95■■■□□ 2.7
ATF4-201ENST00000337304 TBC1D32Q96NH3 1257 aa31.95■■■□□ 2.7
ATF4-201ENST00000337304 CCNL1Q9UK58 526 aaPredicted RBP31.95■■■□□ 2.7
ATF4-201ENST00000337304 KRT27Q7Z3Y8 459 aa31.94■■■□□ 2.7
ATF4-201ENST00000337304 USP42Q9H9J4 1324 aaKnown RBP31.94■■■□□ 2.7
ATF4-201ENST00000337304 RC3H1Q5TC82 1133 aaKnown RBP31.93■■■□□ 2.7
ATF4-201ENST00000337304 SYNE4Q8N205 404 aa31.93■■■□□ 2.7
ATF4-201ENST00000337304 MYH3P11055 1940 aa31.92■■■□□ 2.7
ATF4-201ENST00000337304 PI4K2BQ8TCG2 481 aa31.92■■■□□ 2.7
ATF4-201ENST00000337304 TRMT112Q9UI30 125 aaKnown RBP31.92■■■□□ 2.7
ATF4-201ENST00000337304 MSH5O43196 834 aa31.92■■■□□ 2.7
ATF4-201ENST00000337304 FAM196AQ6ZSG2 479 aa31.91■■■□□ 2.7
ATF4-201ENST00000337304 RBM6P78332 1123 aaKnown RBP31.9■■■□□ 2.7
ATF4-201ENST00000337304 AACSQ86V21 672 aa31.9■■■□□ 2.7
ATF4-201ENST00000337304 EAF2Q96CJ1 260 aaPredicted RBP31.9■■■□□ 2.7
ATF4-201ENST00000337304 TTC41PQ6P2S7 1318 aa31.9■■■□□ 2.7
ATF4-201ENST00000337304 IFIT2P09913 472 aaKnown RBP31.9■■■□□ 2.7
ATF4-201ENST00000337304 CSF1RP07333 972 aa31.89■■■□□ 2.7
ATF4-201ENST00000337304 C22orf23Q9BZE7 217 aa31.88■■■□□ 2.69
ATF4-201ENST00000337304 AK9Q5TCS8 1911 aa31.87■■■□□ 2.69
ATF4-201ENST00000337304 RPS6KA4O75676 772 aa31.87■■■□□ 2.69
ATF4-201ENST00000337304 IRS4O14654 1257 aaPredicted RBP31.87■■■□□ 2.69
ATF4-201ENST00000337304 TFCP2Q12800 502 aa31.87■■■□□ 2.69
ATF4-201ENST00000337304 SUSD4Q5VX71 490 aa31.87■■■□□ 2.69
ATF4-201ENST00000337304 DDRGK1Q96HY6 314 aa31.87■■■□□ 2.69
ATF4-201ENST00000337304 SCN7AQ01118 1682 aa31.86■■■□□ 2.69
ATF4-201ENST00000337304 ZNF652Q9Y2D9 606 aa31.86■■■□□ 2.69
ATF4-201ENST00000337304 TRIM6-TRIM34B2RNG4 842 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 PARP10Q53GL7 1025 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 ATG9AQ7Z3C6 839 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 ZNF594Q96JF6 807 aaPredicted RBP31.85■■■□□ 2.69
ATF4-201ENST00000337304 ECHDC1Q9NTX5 307 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 C4BP0C0L5 1744 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 CCDC57Q2TAC2 916 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 CLEC4GQ6UXB4 293 aa31.85■■■□□ 2.69
ATF4-201ENST00000337304 CCDC8Q9H0W5 538 aaPredicted RBP31.85■■■□□ 2.69
ATF4-201ENST00000337304 CASC1Q6TDU7 716 aa31.84■■■□□ 2.69
ATF4-201ENST00000337304 RILPL2Q969X0 211 aa31.84■■■□□ 2.69
ATF4-201ENST00000337304 GPATCH3Q96I76 525 aa31.84■■■□□ 2.69
ATF4-201ENST00000337304 NIP7Q9Y221 180 aaKnown RBP eCLIP31.84■■■□□ 2.69
ATF4-201ENST00000337304 CTSWP56202 376 aa31.83■■■□□ 2.69
ATF4-201ENST00000337304 SMIM5Q71RC9 77 aa31.83■■■□□ 2.69
ATF4-201ENST00000337304 TTLL11Q8NHH1 800 aa31.83■■■□□ 2.69
ATF4-201ENST00000337304 EP400Q96L91 3159 aa31.83■■■□□ 2.69
ATF4-201ENST00000337304 GNPATO15228 680 aa31.83■■■□□ 2.69
ATF4-201ENST00000337304 GLRX3O76003 335 aaKnown RBP31.83■■■□□ 2.69
ATF4-201ENST00000337304 UTP14AQ9BVJ6 771 aaKnown RBP31.83■■■□□ 2.69
ATF4-201ENST00000337304 TLR7Q9NYK1 1049 aaKnown RBP31.83■■■□□ 2.69
ATF4-201ENST00000337304 EYA2O00167 538 aa31.82■■■□□ 2.68
ATF4-201ENST00000337304 ERC2O15083 957 aa31.82■■■□□ 2.68
ATF4-201ENST00000337304 PDE8AO60658 829 aa31.82■■■□□ 2.68
ATF4-201ENST00000337304 TNNI3KQ59H18 835 aa31.82■■■□□ 2.68
ATF4-201ENST00000337304 CCDC85AQ96PX6 553 aaPredicted RBP31.82■■■□□ 2.68
ATF4-201ENST00000337304 FPGT-TNNI3KV9GXZ4 949 aa31.82■■■□□ 2.68
ATF4-201ENST00000337304 EIF5BO60841 1220 aaKnown RBP31.81■■■□□ 2.68
ATF4-201ENST00000337304 CIAO1O76071 339 aa31.81■■■□□ 2.68
ATF4-201ENST00000337304 IL15P40933 162 aaPredicted RBP31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms