RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 USP25Q9UHP3 1055 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 TIAM1Q13009 1591 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 TMCO5BA8MYB1 307 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 IVLP07476 585 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 CCDC6Q16204 474 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 TMTC2Q8N394 836 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 USP16Q9Y5T5 823 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 CCDC160A6NGH7 325 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 NUTM2BA6NNL0 878 aaPredicted RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 NUTM2EB1AL46 878 aaPredicted RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 GJB2P29033 226 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 ZNF165P49910 485 aa14.99□□□□□ -0.01
HLCS-201ENST00000336648 NUTM2AQ8IVF1 878 aaPredicted RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 NSRP1Q9H0G5 558 aaKnown RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 TTC12Q9H892 705 aaPredicted RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 TRMT112Q9UI30 125 aaKnown RBP14.99□□□□□ -0.01
HLCS-201ENST00000336648 SSFA2P28290 1259 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 CYLC1P35663 651 aaPredicted RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 MCM10Q7L590 875 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 STMN4Q9H169 189 aaPredicted RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 NOL3O60936 208 aaKnown RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 HSF2BPO75031 334 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 SETSIPP0DME0 302 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 GSTO1P78417 241 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 SMARCA5O60264 1052 aaPredicted RBP14.98□□□□□ -0.01
HLCS-201ENST00000336648 ZWINTO95229 277 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 TMEM67Q5HYA8 995 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 KAT14Q9H8E8 782 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 IKBKGQ9Y6K9 419 aa14.98□□□□□ -0.01
HLCS-201ENST00000336648 PABPN1LA6NDY0 278 aaKnown RBP14.97□□□□□ -0.01
HLCS-201ENST00000336648 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
HLCS-201ENST00000336648 ADCY5O95622 1261 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 KIAA0753Q2KHM9 967 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 ORC3Q9UBD5 711 aaPredicted RBP14.97□□□□□ -0.01
HLCS-201ENST00000336648 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
HLCS-201ENST00000336648 HLA-DOAP06340 250 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 CKAP2LQ8IYA6 745 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 CABP5Q9NP86 173 aa14.97□□□□□ -0.01
HLCS-201ENST00000336648 METAP2P50579 478 aaKnown RBP eCLIP14.97□□□□□ -0.01
HLCS-201ENST00000336648 CCDC85AQ96PX6 553 aaPredicted RBP14.97□□□□□ -0.01
HLCS-201ENST00000336648 MACROD2A1Z1Q3 448 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 MAATS1Q7Z4T9 603 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 KCNG4Q8TDN1 519 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 CPLX3Q8WVH0 158 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 CEP135Q66GS9 1140 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 C16orf45Q96MC5 204 aaPredicted RBP14.96□□□□□ -0.01
HLCS-201ENST00000336648 RASAL2Q9UJF2 1139 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 TBCAO75347 108 aaKnown RBP14.96□□□□□ -0.01
HLCS-201ENST00000336648 MSL1Q68DK7 614 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 CCDC8Q9H0W5 538 aaPredicted RBP14.96□□□□□ -0.01
HLCS-201ENST00000336648 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.01
HLCS-201ENST00000336648 FLIIQ13045 1269 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 TCERG1LQ5VWI1 586 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 CCDC77Q9BR77 488 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 KRT23Q9C075 422 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 EXOC1Q9NV70 894 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 CEP83Q9Y592 693 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 NOP2P46087 812 aaKnown RBP14.96□□□□□ -0.02
HLCS-201ENST00000336648 GNAQP50148 359 aa14.96□□□□□ -0.02
HLCS-201ENST00000336648 PRC1O43663 620 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 SELENOOQ9BVL4 669 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 ZMYND15Q9H091 742 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 IDEP14735 1019 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 ZC3H6P61129 1189 aaKnown RBP14.95□□□□□ -0.02
HLCS-201ENST00000336648 CNNM2Q9H8M5 875 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
HLCS-201ENST00000336648 GUCY1B3Q02153 619 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 SYCP3Q8IZU3 236 aa14.95□□□□□ -0.02
HLCS-201ENST00000336648 CWC25Q9NXE8 425 aaPredicted RBP14.95□□□□□ -0.02
HLCS-201ENST00000336648 CPSF2Q9P2I0 782 aaKnown RBP14.95□□□□□ -0.02
HLCS-201ENST00000336648 RBM27Q9P2N5 1060 aaKnown RBP14.95□□□□□ -0.02
HLCS-201ENST00000336648 TRMT1Q9NXH9 659 aaKnown RBP14.94□□□□□ -0.02
HLCS-201ENST00000336648 N4BP3O15049 544 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 AKR1B10O60218 316 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 COMMD10Q9Y6G5 202 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 CAMSAP2Q08AD1 1489 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 TUBBP07437 444 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 GNG11P61952 73 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 TTC22Q5TAA0 569 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 OPA1O60313 960 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 PPP1R42Q7Z4L9 355 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 TRIM47Q96LD4 638 aa14.94□□□□□ -0.02
HLCS-201ENST00000336648 CRNKL1Q9BZJ0 848 aaKnown RBP14.94□□□□□ -0.02
HLCS-201ENST00000336648 TTC14Q96N46 770 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 PRXQ9BXM0 1461 aa14.93□□□□□ -0.02
HLCS-201ENST00000336648 KIF3CO14782 793 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms