RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
LRAT-201ENST00000336356 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 SMTNL1A8MU46 457 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 H0YHG0 523 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 CNTROBQ8N137 903 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
LRAT-201ENST00000336356 GNPATO15228 680 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 SMC2O95347 1197 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 GNAI3P08754 354 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
LRAT-201ENST00000336356 C3P01024 1663 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
LRAT-201ENST00000336356 TRERF1Q96PN7 1200 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
LRAT-201ENST00000336356 TMPOP42166 694 aaKnown RBP12.93□□□□□ -0.34
LRAT-201ENST00000336356 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 MX1P20591 662 aa12.93□□□□□ -0.34
LRAT-201ENST00000336356 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 CLIP2Q9UDT6 1046 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 IGSF3O75054 1194 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
LRAT-201ENST00000336356 LARP1BQ659C4 914 aaKnown RBP12.92□□□□□ -0.34
LRAT-201ENST00000336356 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
LRAT-201ENST00000336356 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
LRAT-201ENST00000336356 LRRC7Q96NW7 1537 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 LMOD1P29536 600 aaPredicted RBP12.92□□□□□ -0.34
LRAT-201ENST00000336356 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
LRAT-201ENST00000336356 CDC5LQ99459 802 aaKnown RBP12.91□□□□□ -0.34
LRAT-201ENST00000336356 CTDP1Q9Y5B0 961 aaPredicted RBP12.91□□□□□ -0.34
LRAT-201ENST00000336356 FAM177BA6PVY3 158 aa12.91□□□□□ -0.34
LRAT-201ENST00000336356 SCAND2PQ9GZW5 306 aaPredicted RBP12.91□□□□□ -0.34
LRAT-201ENST00000336356 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
LRAT-201ENST00000336356 SPATA32Q96LK8 384 aa12.91□□□□□ -0.34
LRAT-201ENST00000336356 RLBP1P12271 317 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 ANKRD1Q15327 319 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 NLRP3Q96P20 1036 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 EYA3Q99504 573 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 TECPR2O15040 1411 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 DDX19AQ9NUU7 478 aaKnown RBP12.9□□□□□ -0.34
LRAT-201ENST00000336356 CRB1P82279 1406 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 GSDMDP57764 484 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 TMX3Q96JJ7 454 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 CLTCL1P53675 1640 aa12.9□□□□□ -0.34
LRAT-201ENST00000336356 H0YIN7 160 aa12.9□□□□□ -0.35
LRAT-201ENST00000336356 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.35
LRAT-201ENST00000336356 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.35
LRAT-201ENST00000336356 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.35
LRAT-201ENST00000336356 FAM83GA6ND36 823 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 KDM4AO75164 1064 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
LRAT-201ENST00000336356 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 TTC22Q5TAA0 569 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 ERBB4Q15303 1308 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 GNAI2P04899 355 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 IFIT2P09913 472 aaKnown RBP12.89□□□□□ -0.35
LRAT-201ENST00000336356 PDE6BP35913 854 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
LRAT-201ENST00000336356 POLR3GO15318 223 aaPredicted RBP12.89□□□□□ -0.35
LRAT-201ENST00000336356 SFPQP23246 707 aaKnown RBP eCLIP12.89□□□□□ -0.35
LRAT-201ENST00000336356 CCDC57Q2TAC2 916 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
LRAT-201ENST00000336356 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 CFAP45Q9UL16 551 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 IL16Q14005 1332 aa12.89□□□□□ -0.35
LRAT-201ENST00000336356 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
LRAT-201ENST00000336356 TUBB4AP04350 444 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
LRAT-201ENST00000336356 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 POLKQ9UBT6 870 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 SLF2Q8IX21 1173 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 UPF3BQ9BZI7 483 aaKnown RBP12.88□□□□□ -0.35
LRAT-201ENST00000336356 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
LRAT-201ENST00000336356 SLU7O95391 586 aaKnown RBP12.87□□□□□ -0.35
LRAT-201ENST00000336356 ADRA2BP18089 450 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 NF2P35240 595 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 FAM193AP78312 1265 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 CCDC186Q7Z3E2 898 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 PLCD3Q8N3E9 789 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 CBFA2T2O43439 604 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 EYA1Q99502 592 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 MYL6BP14649 208 aa12.87□□□□□ -0.35
LRAT-201ENST00000336356 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
LRAT-201ENST00000336356 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
LRAT-201ENST00000336356 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
LRAT-201ENST00000336356 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms