RNA–Protein interactions for RNA: ENST00000336292.10

SYNM-202, Transcript of synemin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNM, Length 7,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-202ENST00000336292 NFATC2IPQ8NCF5 419 aa20.84■□□□□ 0.93
SYNM-202ENST00000336292 EIF6P56537 245 aaKnown RBP20.84■□□□□ 0.93
SYNM-202ENST00000336292 SPOUT1Q5T280 376 aaKnown RBP20.84■□□□□ 0.93
SYNM-202ENST00000336292 EZRP15311 586 aaKnown RBP20.84■□□□□ 0.93
SYNM-202ENST00000336292 GJC1P36383 396 aa20.84■□□□□ 0.93
SYNM-202ENST00000336292 ATXN8OSP0DMR3 200 aa20.84■□□□□ 0.93
SYNM-202ENST00000336292 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
SYNM-202ENST00000336292 RAB34Q9BZG1 259 aa20.83■□□□□ 0.93
SYNM-202ENST00000336292 LDHCP07864 332 aa20.83■□□□□ 0.93
SYNM-202ENST00000336292 PLB1Q6P1J6 1458 aa20.83■□□□□ 0.93
SYNM-202ENST00000336292 CALML4Q96GE6 196 aa20.83■□□□□ 0.92
SYNM-202ENST00000336292 NUP62CLQ9H1M0 184 aa20.83■□□□□ 0.92
SYNM-202ENST00000336292 EHBP1L1Q8N3D4 1523 aa20.83■□□□□ 0.92
SYNM-202ENST00000336292 PABPN1LA6NDY0 278 aaKnown RBP20.83■□□□□ 0.92
SYNM-202ENST00000336292 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.92
SYNM-202ENST00000336292 XAGE3Q8WTP9 111 aa20.83■□□□□ 0.92
SYNM-202ENST00000336292 FKBP15Q5T1M5 1219 aa20.83■□□□□ 0.92
SYNM-202ENST00000336292 ZNF804AQ7Z570 1209 aa20.82■□□□□ 0.92
SYNM-202ENST00000336292 IFIT1BQ5T764 474 aaKnown RBP20.82■□□□□ 0.92
SYNM-202ENST00000336292 GLRX3O76003 335 aaKnown RBP20.82■□□□□ 0.92
SYNM-202ENST00000336292 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
SYNM-202ENST00000336292 DAPK1P53355 1430 aa20.82■□□□□ 0.92
SYNM-202ENST00000336292 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
SYNM-202ENST00000336292 ZBTB9Q96C00 473 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 HSP90AA4PQ58FG1 418 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 CCDC196A0A1B0GTZ2 297 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 CETN2P41208 172 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 ZRANB1Q9UGI0 708 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 RPGRIP1LQ68CZ1 1315 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 COPS6Q7L5N1 327 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 ANKRD13DQ6ZTN6 518 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
SYNM-202ENST00000336292 WDR7Q9Y4E6 1490 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 HARSP12081 509 aaKnown RBP20.81■□□□□ 0.92
SYNM-202ENST00000336292 CCDC40Q4G0X9 1142 aa20.81■□□□□ 0.92
SYNM-202ENST00000336292 GSTO1P78417 241 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 SPA17Q15506 151 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 SORBS3O60504 671 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
SYNM-202ENST00000336292 MTIF2P46199 727 aaKnown RBP20.8■□□□□ 0.92
SYNM-202ENST00000336292 DYDC1Q8WWB3 177 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
SYNM-202ENST00000336292 GOLGA6L10A0A0M3HER8 536 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 CHST3Q7LGC8 479 aa20.8■□□□□ 0.92
SYNM-202ENST00000336292 TMCO5BA8MYB1 307 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 CBFA2T2O43439 604 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
SYNM-202ENST00000336292 TEX13AQ9BXU3 409 aaPredicted RBP20.79■□□□□ 0.92
SYNM-202ENST00000336292 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
SYNM-202ENST00000336292 GRIPAP1Q4V328 841 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.79■□□□□ 0.92
SYNM-202ENST00000336292 FLIIQ13045 1269 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 CNNM3Q8NE01 707 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 BCS1LQ9Y276 419 aa20.79■□□□□ 0.92
SYNM-202ENST00000336292 NOP2P46087 812 aaKnown RBP20.79■□□□□ 0.92
SYNM-202ENST00000336292 TFIP11Q9UBB9 837 aaKnown RBP20.79■□□□□ 0.92
SYNM-202ENST00000336292 NOS1P29475 1434 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 TMEM110-MUSTN1A8MSY1 372 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 CCDC174Q6PII3 467 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 SSH1Q8WYL5 1049 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 ARHGAP27Q6ZUM4 889 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 SMARCC2Q8TAQ2 1214 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
SYNM-202ENST00000336292 TCP10Q12799 353 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.78■□□□□ 0.92
SYNM-202ENST00000336292 PICK1Q9NRD5 415 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 KIF5BP33176 963 aa20.78■□□□□ 0.92
SYNM-202ENST00000336292 CCNL1Q9UK58 526 aaPredicted RBP20.78■□□□□ 0.92
SYNM-202ENST00000336292 METAP2P50579 478 aaKnown RBP eCLIP20.77■□□□□ 0.92
SYNM-202ENST00000336292 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
SYNM-202ENST00000336292 NPHP3Q7Z494 1330 aa20.77■□□□□ 0.92
SYNM-202ENST00000336292 TCP11L1Q9NUJ3 509 aa20.77■□□□□ 0.92
SYNM-202ENST00000336292 USP21Q9UK80 565 aa20.77■□□□□ 0.92
SYNM-202ENST00000336292 SSX2IPQ9Y2D8 614 aa20.77■□□□□ 0.91
SYNM-202ENST00000336292 TNRQ92752 1358 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 IL2RBP14784 551 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 TTF1Q15361 905 aaPredicted RBP20.76■□□□□ 0.91
SYNM-202ENST00000336292 MAGEB6Q8N7X4 407 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 FAM170AA1A519 330 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 ARHGAP29Q52LW3 1261 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 TSPOAP1O95153 1857 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 MBD3O95983 291 aa20.76■□□□□ 0.91
SYNM-202ENST00000336292 CCP110O43303 1012 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 AFMP43652 599 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 HOOK3Q86VS8 718 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 PLIN2Q99541 437 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 GDPD2Q9HCC8 539 aa20.75■□□□□ 0.91
SYNM-202ENST00000336292 BACH1O14867 736 aa20.74■□□□□ 0.91
SYNM-202ENST00000336292 CCDC102AQ96A19 550 aa20.74■□□□□ 0.91
SYNM-202ENST00000336292 NCBP1Q09161 790 aaKnown RBP20.74■□□□□ 0.91
SYNM-202ENST00000336292 TXLNBQ8N3L3 684 aa20.74■□□□□ 0.91
SYNM-202ENST00000336292 TBCAO75347 108 aaKnown RBP20.74■□□□□ 0.91
SYNM-202ENST00000336292 CNGA1P29973 690 aa20.74■□□□□ 0.91
SYNM-202ENST00000336292 MCM9Q9NXL9 1143 aa20.74■□□□□ 0.91
SYNM-202ENST00000336292 MRVI1Q9Y6F6 885 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms