RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 C1orf115Q9H7X2 142 aa27.08■■□□□ 1.93
TPM1-204ENST00000334895 CWC25Q9NXE8 425 aaPredicted RBP27.08■■□□□ 1.93
TPM1-204ENST00000334895 ZNF652Q9Y2D9 606 aa27.08■■□□□ 1.93
TPM1-204ENST00000334895 GRM8O00222 908 aa27.08■■□□□ 1.93
TPM1-204ENST00000334895 CHMP4BQ9H444 224 aaKnown RBP27.08■■□□□ 1.93
TPM1-204ENST00000334895 AAMPQ13685 434 aa27.07■■□□□ 1.92
TPM1-204ENST00000334895 GNAI3P08754 354 aa27.06■■□□□ 1.92
TPM1-204ENST00000334895 TBC1D9BQ66K14 1250 aa27.06■■□□□ 1.92
TPM1-204ENST00000334895 C9orf78Q9NZ63 289 aaPredicted RBP27.06■■□□□ 1.92
TPM1-204ENST00000334895 PCDHB15Q9Y5E8 787 aa27.06■■□□□ 1.92
TPM1-204ENST00000334895 GYS1P13807 737 aa27.05■■□□□ 1.92
TPM1-204ENST00000334895 CASP7P55210 303 aa27.05■■□□□ 1.92
TPM1-204ENST00000334895 FLAD1Q8NFF5 587 aa27.05■■□□□ 1.92
TPM1-204ENST00000334895 JARID2Q92833 1246 aaPredicted RBP27.05■■□□□ 1.92
TPM1-204ENST00000334895 NIP7Q9Y221 180 aaKnown RBP eCLIP27.05■■□□□ 1.92
TPM1-204ENST00000334895 COL24A1Q17RW2 1714 aa27.05■■□□□ 1.92
TPM1-204ENST00000334895 H7C1W4 665 aa27.04■■□□□ 1.92
TPM1-204ENST00000334895 UBTFL1P0CB47 393 aaPredicted RBP27.04■■□□□ 1.92
TPM1-204ENST00000334895 PPP4R2Q9NY27 417 aa27.03■■□□□ 1.92
TPM1-204ENST00000334895 SRCAPQ6ZRS2 3230 aa27.02■■□□□ 1.92
TPM1-204ENST00000334895 SUSD4Q5VX71 490 aa27.02■■□□□ 1.92
TPM1-204ENST00000334895 UBE3BQ7Z3V4 1068 aa27.02■■□□□ 1.92
TPM1-204ENST00000334895 LRRFIP2Q9Y608 721 aaKnown RBP27.02■■□□□ 1.92
TPM1-204ENST00000334895 GNAI2P04899 355 aa27.01■■□□□ 1.92
TPM1-204ENST00000334895 KAZALD1Q96I82 304 aa27.01■■□□□ 1.92
TPM1-204ENST00000334895 PARP10Q53GL7 1025 aa27.01■■□□□ 1.91
TPM1-204ENST00000334895 BICDL1Q6ZP65 573 aa27.01■■□□□ 1.91
TPM1-204ENST00000334895 SUCLG2Q96I99 432 aa27.01■■□□□ 1.91
TPM1-204ENST00000334895 PCCAP05165 728 aaPredicted RBP27■■□□□ 1.91
TPM1-204ENST00000334895 RTL5Q5HYW3 569 aaPredicted RBP27■■□□□ 1.91
TPM1-204ENST00000334895 MSH5O43196 834 aa26.99■■□□□ 1.91
TPM1-204ENST00000334895 NFIXQ14938 502 aa26.99■■□□□ 1.91
TPM1-204ENST00000334895 SYNE4Q8N205 404 aa26.99■■□□□ 1.91
TPM1-204ENST00000334895 ZBTB38Q8NAP3 1195 aaPredicted RBP26.99■■□□□ 1.91
TPM1-204ENST00000334895 NTSR2O95665 410 aa26.98■■□□□ 1.91
TPM1-204ENST00000334895 FAM89AQ96GI7 184 aa26.98■■□□□ 1.91
TPM1-204ENST00000334895 ZBTB7AO95365 584 aa26.98■■□□□ 1.91
TPM1-204ENST00000334895 CEP85Q6P2H3 762 aa26.98■■□□□ 1.91
TPM1-204ENST00000334895 SIRT2Q8IXJ6 389 aa26.98■■□□□ 1.91
TPM1-204ENST00000334895 TRMT112Q9UI30 125 aaKnown RBP26.98■■□□□ 1.91
TPM1-204ENST00000334895 FAM177BA6PVY3 158 aa26.97■■□□□ 1.91
TPM1-204ENST00000334895 EPHA10Q5JZY3 1008 aa26.97■■□□□ 1.91
TPM1-204ENST00000334895 B4GALNT3Q6L9W6 998 aa26.97■■□□□ 1.91
TPM1-204ENST00000334895 SETDB2Q96T68 719 aa26.97■■□□□ 1.91
TPM1-204ENST00000334895 UTP14AQ9BVJ6 771 aaKnown RBP26.97■■□□□ 1.91
TPM1-204ENST00000334895 TM4SF1P30408 202 aa26.95■■□□□ 1.91
TPM1-204ENST00000334895 CDHR2Q9BYE9 1310 aa26.95■■□□□ 1.9
TPM1-204ENST00000334895 PPP1R42Q7Z4L9 355 aa26.94■■□□□ 1.9
TPM1-204ENST00000334895 ANKRD44Q8N8A2 993 aa26.94■■□□□ 1.9
TPM1-204ENST00000334895 BICC1Q9H694 974 aaKnown RBP26.94■■□□□ 1.9
TPM1-204ENST00000334895 CARMIL3Q8ND23 1372 aa26.94■■□□□ 1.9
TPM1-204ENST00000334895 LRP5O75197 1615 aa26.94■■□□□ 1.9
TPM1-204ENST00000334895 DDX60Q8IY21 1712 aaKnown RBP26.94■■□□□ 1.9
TPM1-204ENST00000334895 CCDC136Q96JN2 1154 aa26.94■■□□□ 1.9
TPM1-204ENST00000334895 SH3TC1Q8TE82 1336 aa26.93■■□□□ 1.9
TPM1-204ENST00000334895 LAMB2P55268 1798 aa26.93■■□□□ 1.9
TPM1-204ENST00000334895 DDR1Q08345 913 aa26.93■■□□□ 1.9
TPM1-204ENST00000334895 NUTM1Q86Y26 1132 aa26.93■■□□□ 1.9
TPM1-204ENST00000334895 IGHDP01880 384 aa26.92■■□□□ 1.9
TPM1-204ENST00000334895 FOXO4P98177 505 aa26.92■■□□□ 1.9
TPM1-204ENST00000334895 RPAP2Q8IXW5 612 aaPredicted RBP26.92■■□□□ 1.9
TPM1-204ENST00000334895 NLGN1Q8N2Q7 840 aa26.92■■□□□ 1.9
TPM1-204ENST00000334895 MTFR1LQ9H019 292 aa26.92■■□□□ 1.9
TPM1-204ENST00000334895 HDAC5Q9UQL6 1122 aa26.92■■□□□ 1.9
TPM1-204ENST00000334895 ATF5Q9Y2D1 282 aaPredicted RBP26.92■■□□□ 1.9
TPM1-204ENST00000334895 SLC16A10Q8TF71 515 aa26.91■■□□□ 1.9
TPM1-204ENST00000334895 PLA2G12BQ9BX93 195 aa26.91■■□□□ 1.9
TPM1-204ENST00000334895 PNMA6EA0A0J9YXQ4 647 aa26.9■■□□□ 1.9
TPM1-204ENST00000334895 ATP8B2P98198 1209 aa26.9■■□□□ 1.9
TPM1-204ENST00000334895 MSL1Q68DK7 614 aa26.9■■□□□ 1.9
TPM1-204ENST00000334895 IRS4O14654 1257 aaPredicted RBP26.9■■□□□ 1.9
TPM1-204ENST00000334895 MTX1Q13505 466 aa26.9■■□□□ 1.9
TPM1-204ENST00000334895 HDAC1Q13547 482 aaPredicted RBP26.9■■□□□ 1.9
TPM1-204ENST00000334895 RABL6Q3YEC7 729 aaPredicted RBP26.9■■□□□ 1.9
TPM1-204ENST00000334895 ERFEQ4G0M1 354 aa26.9■■□□□ 1.9
TPM1-204ENST00000334895 NBPF5PQ86XG9 351 aaPredicted RBP26.9■■□□□ 1.9
TPM1-204ENST00000334895 ABCC12Q96J65 1359 aa26.89■■□□□ 1.9
TPM1-204ENST00000334895 POLRMTO00411 1230 aaKnown RBP26.89■■□□□ 1.9
TPM1-204ENST00000334895 MYH3P11055 1940 aa26.89■■□□□ 1.89
TPM1-204ENST00000334895 NYXQ9GZU5 481 aa26.88■■□□□ 1.89
TPM1-204ENST00000334895 SPON1Q9HCB6 807 aa26.88■■□□□ 1.89
TPM1-204ENST00000334895 NRXN2Q9P2S2 1712 aa26.88■■□□□ 1.89
TPM1-204ENST00000334895 KDM2BQ8NHM5 1336 aa26.88■■□□□ 1.89
TPM1-204ENST00000334895 HCLS1P14317 486 aaPredicted RBP26.87■■□□□ 1.89
TPM1-204ENST00000334895 SERPINB2P05120 415 aa26.86■■□□□ 1.89
TPM1-204ENST00000334895 POLA2Q14181 598 aa26.86■■□□□ 1.89
TPM1-204ENST00000334895 LMBR1LQ6UX01 489 aa26.86■■□□□ 1.89
TPM1-204ENST00000334895 TPTE2Q6XPS3 522 aa26.86■■□□□ 1.89
TPM1-204ENST00000334895 SSH3Q8TE77 659 aa26.86■■□□□ 1.89
TPM1-204ENST00000334895 RWDD1Q9H446 243 aaPredicted RBP26.86■■□□□ 1.89
TPM1-204ENST00000334895 SRGAP3O43295 1099 aa26.85■■□□□ 1.89
TPM1-204ENST00000334895 MMP10P09238 476 aa26.85■■□□□ 1.89
TPM1-204ENST00000334895 SLC10A5Q5PT55 438 aa26.85■■□□□ 1.89
TPM1-204ENST00000334895 PRR5LQ6MZQ0 368 aa26.85■■□□□ 1.89
TPM1-204ENST00000334895 CCDC24Q8N4L8 307 aa26.85■■□□□ 1.89
TPM1-204ENST00000334895 TNRC6CQ9HCJ0 1690 aaKnown RBP26.85■■□□□ 1.89
TPM1-204ENST00000334895 PDE8AO60658 829 aa26.84■■□□□ 1.89
TPM1-204ENST00000334895 PTGER2P43116 358 aa26.84■■□□□ 1.89
TPM1-204ENST00000334895 CNBD1Q8NA66 436 aa26.84■■□□□ 1.89
TPM1-204ENST00000334895 CSF1RP07333 972 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms