RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SUSD4Q5VX71 490 aa23.61■■□□□ 1.37
HLA-F-217ENST00000334668 CCDC24Q8N4L8 307 aa23.61■■□□□ 1.37
HLA-F-217ENST00000334668 COL11A2P13942 1736 aaPredicted RBP23.61■■□□□ 1.37
HLA-F-217ENST00000334668 TCERG1O14776 1098 aaKnown RBP23.6■■□□□ 1.37
HLA-F-217ENST00000334668 NTSR2O95665 410 aa23.6■■□□□ 1.37
HLA-F-217ENST00000334668 PDE6BP35913 854 aa23.6■■□□□ 1.37
HLA-F-217ENST00000334668 ISCA1Q9BUE6 129 aa23.6■■□□□ 1.37
HLA-F-217ENST00000334668 RIC1Q4ADV7 1423 aa23.59■■□□□ 1.37
HLA-F-217ENST00000334668 TRIM28Q13263 835 aaKnown RBP23.59■■□□□ 1.37
HLA-F-217ENST00000334668 PPP1R42Q7Z4L9 355 aa23.59■■□□□ 1.37
HLA-F-217ENST00000334668 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
HLA-F-217ENST00000334668 PIM2Q9P1W9 311 aa23.59■■□□□ 1.37
HLA-F-217ENST00000334668 FAM177BA6PVY3 158 aa23.58■■□□□ 1.37
HLA-F-217ENST00000334668 NPHP1O15259 732 aa23.58■■□□□ 1.37
HLA-F-217ENST00000334668 GRIN3BO60391 1043 aa23.58■■□□□ 1.37
HLA-F-217ENST00000334668 G2E3Q7L622 706 aa23.58■■□□□ 1.37
HLA-F-217ENST00000334668 H0YIN7 160 aa23.57■■□□□ 1.36
HLA-F-217ENST00000334668 DDX58O95786 925 aaKnown RBP23.57■■□□□ 1.36
HLA-F-217ENST00000334668 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
HLA-F-217ENST00000334668 C2CD5Q86YS7 1000 aa23.57■■□□□ 1.36
HLA-F-217ENST00000334668 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
HLA-F-217ENST00000334668 RNF123Q5XPI4 1314 aa23.57■■□□□ 1.36
HLA-F-217ENST00000334668 ABCC12Q96J65 1359 aa23.56■■□□□ 1.36
HLA-F-217ENST00000334668 KSR2Q6VAB6 950 aa23.56■■□□□ 1.36
HLA-F-217ENST00000334668 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
HLA-F-217ENST00000334668 UTP14AQ9BVJ6 771 aaKnown RBP23.56■■□□□ 1.36
HLA-F-217ENST00000334668 ADCY9O60503 1353 aa23.55■■□□□ 1.36
HLA-F-217ENST00000334668 TNRC6CQ9HCJ0 1690 aaKnown RBP23.55■■□□□ 1.36
HLA-F-217ENST00000334668 SRGNP10124 158 aa23.55■■□□□ 1.36
HLA-F-217ENST00000334668 HNRNPUQ00839 825 aaKnown RBP eCLIP23.55■■□□□ 1.36
HLA-F-217ENST00000334668 FLIIQ13045 1269 aa23.55■■□□□ 1.36
HLA-F-217ENST00000334668 ERFEQ4G0M1 354 aa23.55■■□□□ 1.36
HLA-F-217ENST00000334668 WWC3Q9ULE0 1092 aa23.55■■□□□ 1.36
HLA-F-217ENST00000334668 PI4KAP2A4QPH2 592 aa23.54■■□□□ 1.36
HLA-F-217ENST00000334668 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
HLA-F-217ENST00000334668 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
HLA-F-217ENST00000334668 SLC10A5Q5PT55 438 aa23.54■■□□□ 1.36
HLA-F-217ENST00000334668 PI4KAP1Q8N8J0 262 aa23.54■■□□□ 1.36
HLA-F-217ENST00000334668 METTL22Q9BUU2 404 aaPredicted RBP23.54■■□□□ 1.36
HLA-F-217ENST00000334668 BCS1LQ9Y276 419 aa23.54■■□□□ 1.36
HLA-F-217ENST00000334668 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
HLA-F-217ENST00000334668 MAP3K2Q9Y2U5 619 aa23.53■■□□□ 1.36
HLA-F-217ENST00000334668 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
HLA-F-217ENST00000334668 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
HLA-F-217ENST00000334668 STYK1Q6J9G0 422 aa23.52■■□□□ 1.36
HLA-F-217ENST00000334668 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
HLA-F-217ENST00000334668 MASTLQ96GX5 879 aa23.52■■□□□ 1.36
HLA-F-217ENST00000334668 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
HLA-F-217ENST00000334668 CHRDL2Q6WN34 429 aa23.51■■□□□ 1.35
HLA-F-217ENST00000334668 SLX4Q8IY92 1834 aa23.51■■□□□ 1.35
HLA-F-217ENST00000334668 LAMB2P55268 1798 aa23.5■■□□□ 1.35
HLA-F-217ENST00000334668 CCDC191Q8NCU4 936 aa23.5■■□□□ 1.35
HLA-F-217ENST00000334668 MYD88Q99836 296 aa23.5■■□□□ 1.35
HLA-F-217ENST00000334668 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
HLA-F-217ENST00000334668 CACNA1SQ13698 1873 aa23.49■■□□□ 1.35
HLA-F-217ENST00000334668 NPR1P16066 1061 aa23.49■■□□□ 1.35
HLA-F-217ENST00000334668 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
HLA-F-217ENST00000334668 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
HLA-F-217ENST00000334668 DDX60Q8IY21 1712 aaKnown RBP23.49■■□□□ 1.35
HLA-F-217ENST00000334668 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
HLA-F-217ENST00000334668 SH3TC1Q8TE82 1336 aa23.49■■□□□ 1.35
HLA-F-217ENST00000334668 IGKV5-2P06315 115 aa23.48■■□□□ 1.35
HLA-F-217ENST00000334668 FKBP5Q13451 457 aaPredicted RBP23.48■■□□□ 1.35
HLA-F-217ENST00000334668 CNKSR1Q969H4 720 aa23.48■■□□□ 1.35
HLA-F-217ENST00000334668 MRPL50Q8N5N7 158 aaKnown RBP23.47■■□□□ 1.35
HLA-F-217ENST00000334668 SSH1Q8WYL5 1049 aa23.47■■□□□ 1.35
HLA-F-217ENST00000334668 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-217ENST00000334668 MKRN4PQ13434 485 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-217ENST00000334668 ALDH1L2Q3SY69 923 aa23.46■■□□□ 1.35
HLA-F-217ENST00000334668 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
HLA-F-217ENST00000334668 ZBTB38Q8NAP3 1195 aaPredicted RBP23.46■■□□□ 1.35
HLA-F-217ENST00000334668 DNAAF4Q8WXU2 420 aa23.46■■□□□ 1.35
HLA-F-217ENST00000334668 FAM89AQ96GI7 184 aa23.45■■□□□ 1.34
HLA-F-217ENST00000334668 NLRP3Q96P20 1036 aa23.45■■□□□ 1.34
HLA-F-217ENST00000334668 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
HLA-F-217ENST00000334668 SBF1O95248 1867 aa23.45■■□□□ 1.34
HLA-F-217ENST00000334668 PCCAP05165 728 aaPredicted RBP23.44■■□□□ 1.34
HLA-F-217ENST00000334668 HCLS1P14317 486 aaPredicted RBP23.44■■□□□ 1.34
HLA-F-217ENST00000334668 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
HLA-F-217ENST00000334668 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
HLA-F-217ENST00000334668 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
HLA-F-217ENST00000334668 NEURL1BA8MQ27 555 aa23.43■■□□□ 1.34
HLA-F-217ENST00000334668 ALDH1B1P30837 517 aa23.43■■□□□ 1.34
HLA-F-217ENST00000334668 REM2Q8IYK8 340 aaPredicted RBP23.43■■□□□ 1.34
HLA-F-217ENST00000334668 C7orf43Q8WVR3 580 aa23.43■■□□□ 1.34
HLA-F-217ENST00000334668 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
HLA-F-217ENST00000334668 LINS1Q8NG48 757 aa23.42■■□□□ 1.34
HLA-F-217ENST00000334668 CRAMP1Q96RY5 1269 aa23.42■■□□□ 1.34
HLA-F-217ENST00000334668 F6X3S4 739 aa23.41■■□□□ 1.34
HLA-F-217ENST00000334668 CWF19L2Q2TBE0 894 aaKnown RBP23.41■■□□□ 1.34
HLA-F-217ENST00000334668 ARHGAP27Q6ZUM4 889 aa23.41■■□□□ 1.34
HLA-F-217ENST00000334668 PTPRCP08575 1304 aa23.4■■□□□ 1.34
HLA-F-217ENST00000334668 IRS4O14654 1257 aaPredicted RBP23.4■■□□□ 1.34
HLA-F-217ENST00000334668 BEND3Q5T5X7 828 aa23.4■■□□□ 1.34
HLA-F-217ENST00000334668 RPGRQ92834 1020 aaKnown RBP23.4■■□□□ 1.34
HLA-F-217ENST00000334668 RBM17Q96I25 401 aaKnown RBP23.4■■□□□ 1.34
HLA-F-217ENST00000334668 MYH3P11055 1940 aa23.39■■□□□ 1.34
HLA-F-217ENST00000334668 CDHR2Q9BYE9 1310 aa23.39■■□□□ 1.34
HLA-F-217ENST00000334668 YY1P25490 414 aa23.39■■□□□ 1.33
HLA-F-217ENST00000334668 RARSP54136 660 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms