RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CCDC171Q6TFL3 1326 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 PLEKHG2Q9H7P9 1386 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 PKD1L3Q7Z443 1732 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 MBD3O95983 291 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 PRIM1P49642 420 aaKnown RBP24.61■■□□□ 1.53
LINC01006-201ENST00000333319 NECTIN1Q15223 517 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 UBE3BQ7Z3V4 1068 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 KCNB2Q92953 911 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 CPDO75976 1380 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 RPAP1Q9BWH6 1393 aaPredicted RBP24.61■■□□□ 1.53
LINC01006-201ENST00000333319 ATP5J2-PTCD1G3V325 749 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 PTCD1O75127 700 aaKnown RBP24.61■■□□□ 1.53
LINC01006-201ENST00000333319 ANP32BQ92688 251 aaKnown RBP24.61■■□□□ 1.53
LINC01006-201ENST00000333319 FSD1Q9BTV5 496 aa24.61■■□□□ 1.53
LINC01006-201ENST00000333319 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.61■■□□□ 1.53
LINC01006-201ENST00000333319 CCDC173Q0VFZ6 552 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 PDRG1Q9NUG6 133 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 RBM8AQ9Y5S9 174 aaKnown RBP24.6■■□□□ 1.53
LINC01006-201ENST00000333319 KCNJ4P48050 445 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 TM6SF1Q9BZW5 370 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 ZSWIM6Q9HCJ5 1215 aa24.6■■□□□ 1.53
LINC01006-201ENST00000333319 ZKSCAN1P17029 563 aaPredicted RBP24.59■■□□□ 1.53
LINC01006-201ENST00000333319 VPS53Q5VIR6 699 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 MAP4K1Q92918 833 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 RBSNQ9H1K0 784 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 CYP46A1Q9Y6A2 500 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 AFDNP55196 1824 aaKnown RBP24.59■■□□□ 1.53
LINC01006-201ENST00000333319 LARGE1O95461 756 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 RFX5P48382 616 aaPredicted RBP24.59■■□□□ 1.53
LINC01006-201ENST00000333319 PTPN12Q05209 780 aaKnown RBP24.59■■□□□ 1.53
LINC01006-201ENST00000333319 GDPD2Q9HCC8 539 aa24.59■■□□□ 1.53
LINC01006-201ENST00000333319 A0A087WZG4 1122 aa24.58■■□□□ 1.53
LINC01006-201ENST00000333319 A0A0D9SFI3 127 aa24.58■■□□□ 1.53
LINC01006-201ENST00000333319 SYCE3A1L190 88 aa24.58■■□□□ 1.53
LINC01006-201ENST00000333319 CREB3L3Q68CJ9 461 aa24.58■■□□□ 1.53
LINC01006-201ENST00000333319 PPP1R9BQ96SB3 815 aa24.58■■□□□ 1.53
LINC01006-201ENST00000333319 ESPNB1AK53 854 aa24.58■■□□□ 1.52
LINC01006-201ENST00000333319 CLCN1P35523 988 aa24.58■■□□□ 1.52
LINC01006-201ENST00000333319 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.52
LINC01006-201ENST00000333319 SMC3Q9UQE7 1217 aa24.58■■□□□ 1.52
LINC01006-201ENST00000333319 LRSAM1Q6UWE0 723 aa24.57■■□□□ 1.52
LINC01006-201ENST00000333319 PLBD2Q8NHP8 589 aa24.57■■□□□ 1.52
LINC01006-201ENST00000333319 ARFGEF2Q9Y6D5 1785 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 HSPA2P54652 639 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 TFCP2Q12800 502 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 RABL6Q3YEC7 729 aaPredicted RBP24.56■■□□□ 1.52
LINC01006-201ENST00000333319 SNRKQ9NRH2 765 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 ERBB4Q15303 1308 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 TCHHQ07283 1943 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 SYT1P21579 422 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 CCDC83Q8IWF9 413 aa24.56■■□□□ 1.52
LINC01006-201ENST00000333319 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.56■■□□□ 1.52
LINC01006-201ENST00000333319 STX6O43752 255 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 ZSCAN22P10073 491 aaPredicted RBP24.55■■□□□ 1.52
LINC01006-201ENST00000333319 BRINP3Q76B58 766 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 USP48Q86UV5 1035 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 ANO8Q9HCE9 1232 aaPredicted RBP24.55■■□□□ 1.52
LINC01006-201ENST00000333319 TNNI3KQ59H18 835 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 TOM1L2Q6ZVM7 507 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 EDC3Q96F86 508 aaKnown RBP24.55■■□□□ 1.52
LINC01006-201ENST00000333319 ZSCAN31Q96LW9 406 aaPredicted RBP24.55■■□□□ 1.52
LINC01006-201ENST00000333319 PRDM11Q9NQV5 511 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 DBNLQ9UJU6 430 aaKnown RBP24.55■■□□□ 1.52
LINC01006-201ENST00000333319 FPGT-TNNI3KV9GXZ4 949 aa24.55■■□□□ 1.52
LINC01006-201ENST00000333319 SLC27A2O14975 620 aa24.54■■□□□ 1.52
LINC01006-201ENST00000333319 GADD45BO75293 160 aaPredicted RBP24.54■■□□□ 1.52
LINC01006-201ENST00000333319 ZCRB1Q8TBF4 217 aaKnown RBP24.54■■□□□ 1.52
LINC01006-201ENST00000333319 COL15A1P39059 1388 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 WDR17Q8IZU2 1322 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 GLI3P10071 1580 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 NBPF26B4DH59 902 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 CASP7P55210 303 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 NBPF14Q5TI25 921 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 NBPF10Q6P3W6 841 aaKnown RBP24.53■■□□□ 1.52
LINC01006-201ENST00000333319 NBPF15Q8N660 670 aa24.53■■□□□ 1.52
LINC01006-201ENST00000333319 SH2B1Q9NRF2 756 aaPredicted RBP24.53■■□□□ 1.52
LINC01006-201ENST00000333319 ATP5JP18859 108 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 PCDH11XQ9BZA7 1347 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 PCDH11YQ9BZA8 1340 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 LAMB4A4D0S4 1761 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 GJB2P29033 226 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 MED23Q9ULK4 1368 aa24.52■■□□□ 1.52
LINC01006-201ENST00000333319 DTNBO60941 627 aa24.51■■□□□ 1.51
LINC01006-201ENST00000333319 ZNF589Q86UQ0 364 aaPredicted RBP24.51■■□□□ 1.51
LINC01006-201ENST00000333319 PARP4Q9UKK3 1724 aaKnown RBP24.51■■□□□ 1.51
LINC01006-201ENST00000333319 PSMA5P28066 241 aa24.51■■□□□ 1.51
LINC01006-201ENST00000333319 ME3Q16798 604 aa24.51■■□□□ 1.51
LINC01006-201ENST00000333319 LMBR1LQ6UX01 489 aa24.51■■□□□ 1.51
LINC01006-201ENST00000333319 RNF20Q5VTR2 975 aa24.5■■□□□ 1.51
LINC01006-201ENST00000333319 CNPY2Q9Y2B0 182 aa24.5■■□□□ 1.51
LINC01006-201ENST00000333319 F13A1P00488 732 aa24.5■■□□□ 1.51
LINC01006-201ENST00000333319 COL9A3Q14050 684 aaPredicted RBP24.5■■□□□ 1.51
LINC01006-201ENST00000333319 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
LINC01006-201ENST00000333319 SYAP1Q96A49 352 aaPredicted RBP24.5■■□□□ 1.51
LINC01006-201ENST00000333319 NDUFB9Q9Y6M9 179 aa24.5■■□□□ 1.51
LINC01006-201ENST00000333319 DBNDD2Q9BQY9 259 aa24.49■■□□□ 1.51
LINC01006-201ENST00000333319 CHMP3Q9Y3E7 222 aa24.49■■□□□ 1.51
LINC01006-201ENST00000333319 ST3GAL1Q11201 340 aa24.49■■□□□ 1.51
LINC01006-201ENST00000333319 TMEM87AQ8NBN3 555 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms