RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 SLC5A1P13866 664 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 PRIM1P49642 420 aaKnown RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 TIMM10P62072 90 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 AXIN2Q9Y2T1 843 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ADGRB1O14514 1584 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 GCKRQ14397 625 aa11.27□□□□□ -0.61
SS18L1-201ENST00000331758 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
SS18L1-201ENST00000331758 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NIP7Q9Y221 180 aaKnown RBP eCLIP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 MINDY4BA8MYZ0 360 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 MAP3K12Q12852 859 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 STK38Q15208 465 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 IQSEC3Q9UPP2 1182 aaPredicted RBP11.26□□□□□ -0.61
SS18L1-201ENST00000331758 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 CAVIN4Q5BKX8 364 aa11.26□□□□□ -0.61
SS18L1-201ENST00000331758 NAPBQ9H115 298 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SH2B1Q9NRF2 756 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 IQGAP1P46940 1657 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ANKARQ7Z5J8 1434 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 GSPT1P15170 499 aaKnown RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SNX21Q969T3 373 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF213O14771 459 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ME1P48163 572 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
SS18L1-201ENST00000331758 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
SS18L1-201ENST00000331758 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 GUCY1B3Q02153 619 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 NEK1Q96PY6 1258 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 ANKIB1Q9P2G1 1089 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 KIF24Q5T7B8 1368 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
SS18L1-201ENST00000331758 XBP1P17861 261 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 MPNDQ8N594 471 aa11.24□□□□□ -0.61
SS18L1-201ENST00000331758 NEURL1BA8MQ27 555 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ANAPC15P60006 121 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 DEPDC5O75140 1603 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CPA1P15085 419 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 SYCE3A1L190 88 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 TPD52L1Q16890 204 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 RAB11FIP4Q86YS3 637 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 MED14O60244 1454 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 GJB2P29033 226 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC152Q4G0S7 254 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 BRINP3Q76B58 766 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
SS18L1-201ENST00000331758 BRF1Q92994 677 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 AK7Q96M32 723 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
SS18L1-201ENST00000331758 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 KIAA1210Q9ULL0 1709 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 LRRC7Q96NW7 1537 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 CPS1P31327 1500 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 RFC4P35249 363 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 PIBF1Q8WXW3 757 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
SS18L1-201ENST00000331758 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
SS18L1-201ENST00000331758 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
SS18L1-201ENST00000331758 STX6O43752 255 aa11.21□□□□□ -0.61
SS18L1-201ENST00000331758 HMGB1P09429 215 aaKnown RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 HCLS1P14317 486 aaPredicted RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 EYA2O00167 538 aa11.21□□□□□ -0.61
SS18L1-201ENST00000331758 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
SS18L1-201ENST00000331758 BRMS1Q9HCU9 246 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms