RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 UNC5CLQ8IV45 518 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 ELOA2Q8IYF1 753 aaPredicted RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 SMARCC2Q8TAQ2 1214 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 SMARCA5O60264 1052 aaPredicted RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 CASP7P55210 303 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 UTP14CQ5TAP6 766 aaKnown RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 KAZALD1Q96I82 304 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 ATG3Q9NT62 314 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 NSFL1CQ9UNZ2 370 aaKnown RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 ZNF609O15014 1411 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 RNMTO43148 476 aaKnown RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 CAVIN1Q6NZI2 390 aaKnown RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 LINS1Q8NG48 757 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 ANP32BQ92688 251 aaKnown RBP10.56□□□□□ -0.72
CPNE8-201ENST00000331366 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
CPNE8-201ENST00000331366 FOXO3O43524 673 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 NEK4P51957 841 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 PPP1R42Q7Z4L9 355 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 ANKRD7Q92527 254 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 BPIFA3Q9BQP9 254 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 ECHDC1Q9NTX5 307 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 SCN7AQ01118 1682 aa10.55□□□□□ -0.72
CPNE8-201ENST00000331366 STX6O43752 255 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 TNS3Q68CZ2 1445 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 NRAPQ86VF7 1730 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 MYO5AQ9Y4I1 1855 aaKnown RBP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 BCL9LQ86UU0 1499 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 KDM4AO75164 1064 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 MEGF6O75095 1541 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 ZMYM6O95789 1325 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 COL24A1Q17RW2 1714 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 FAM237AA0A1B0GTK4 181 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 DHX8Q14562 1220 aaKnown RBP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 TMED8Q6PL24 325 aaPredicted RBP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
CPNE8-201ENST00000331366 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
CPNE8-201ENST00000331366 PRPF40AO75400 957 aaKnown RBP10.53□□□□□ -0.72
CPNE8-201ENST00000331366 AK2P54819 239 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 ATP5JP18859 108 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 CHMP4CQ96CF2 233 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 COL14A1Q05707 1796 aaKnown RBP10.53□□□□□ -0.72
CPNE8-201ENST00000331366 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
CPNE8-201ENST00000331366 SYT1P21579 422 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 MLECQ14165 292 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 KIAA1211Q6ZU35 1233 aa10.53□□□□□ -0.72
CPNE8-201ENST00000331366 PDCP20941 246 aa10.52□□□□□ -0.72
CPNE8-201ENST00000331366 KRT32Q14532 448 aa10.52□□□□□ -0.72
CPNE8-201ENST00000331366 KIAA1524Q8TCG1 905 aa10.52□□□□□ -0.72
CPNE8-201ENST00000331366 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.72
CPNE8-201ENST00000331366 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
CPNE8-201ENST00000331366 NAA16Q6N069 864 aaPredicted RBP10.52□□□□□ -0.73
CPNE8-201ENST00000331366 PHF8Q9UPP1 1060 aa10.52□□□□□ -0.73
CPNE8-201ENST00000331366 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
CPNE8-201ENST00000331366 PSMA5P28066 241 aa10.52□□□□□ -0.73
CPNE8-201ENST00000331366 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.73
CPNE8-201ENST00000331366 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
CPNE8-201ENST00000331366 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.73
CPNE8-201ENST00000331366 NUP98P52948 1817 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 F6X3S4 739 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 TUBB4AP04350 444 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 ZNF512BQ96KM6 892 aaPredicted RBP10.51□□□□□ -0.73
CPNE8-201ENST00000331366 EXOC6BQ9Y2D4 811 aa10.51□□□□□ -0.73
CPNE8-201ENST00000331366 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
CPNE8-201ENST00000331366 DDX19AQ9NUU7 478 aaKnown RBP10.51□□□□□ -0.73
CPNE8-201ENST00000331366 MYO1BO43795 1136 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 RPS6KB1P23443 525 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 NPHP3Q7Z494 1330 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 CIAO1O76071 339 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 SASH1O94885 1247 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 KCNA6P17658 529 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 GZF1Q9H116 711 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-201ENST00000331366 TOB2Q14106 344 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-201ENST00000331366 NBPF6Q5VWK0 638 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 NBPF4Q96M43 638 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 ZSCAN16Q9H4T2 348 aaPredicted RBP10.5□□□□□ -0.73
CPNE8-201ENST00000331366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.5□□□□□ -0.73
CPNE8-201ENST00000331366 DUOX1Q9NRD9 1551 aa10.5□□□□□ -0.73
CPNE8-201ENST00000331366 SYCE3A1L190 88 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 AMPHP49418 695 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 SCAND2PQ9GZW5 306 aaPredicted RBP10.49□□□□□ -0.73
CPNE8-201ENST00000331366 NEMFO60524 1076 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 ADD1P35611 737 aaKnown RBP10.49□□□□□ -0.73
CPNE8-201ENST00000331366 RESTQ13127 1097 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 DSCC1Q9BVC3 393 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 CLSTN2Q9H4D0 955 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 ERBB3P21860 1342 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 SLC27A2O14975 620 aa10.49□□□□□ -0.73
CPNE8-201ENST00000331366 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms