RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 CLASRPQ8N2M8 674 aaKnown RBP17.12■□□□□ 0.33
SNX20-202ENST00000330943 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
SNX20-202ENST00000330943 OGFRQ9NZT2 677 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 USP42Q9H9J4 1324 aaKnown RBP17.12■□□□□ 0.33
SNX20-202ENST00000330943 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
SNX20-202ENST00000330943 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 PLA2G4DQ86XP0 818 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
SNX20-202ENST00000330943 PDCP20941 246 aa17.11■□□□□ 0.33
SNX20-202ENST00000330943 HDGFP51858 240 aaKnown RBP17.11■□□□□ 0.33
SNX20-202ENST00000330943 TPD52L1Q16890 204 aaPredicted RBP17.11■□□□□ 0.33
SNX20-202ENST00000330943 CCDC112Q8NEF3 446 aa17.11■□□□□ 0.33
SNX20-202ENST00000330943 DNAJC25Q9H1X3 360 aa17.11■□□□□ 0.33
SNX20-202ENST00000330943 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
SNX20-202ENST00000330943 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
SNX20-202ENST00000330943 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
SNX20-202ENST00000330943 ZNF165P49910 485 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 KCNB2Q92953 911 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 SCAND2PQ9GZW5 306 aaPredicted RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 CLSTN2Q9H4D0 955 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 KCNA6P17658 529 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 SYCP1Q15431 976 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 ZNF771Q7L3S4 317 aaPredicted RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 BICD2Q8TD16 824 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 CACTINQ8WUQ7 758 aaKnown RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
SNX20-202ENST00000330943 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
SNX20-202ENST00000330943 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.09■□□□□ 0.33
SNX20-202ENST00000330943 NR1I2O75469 434 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 IFIT2P09913 472 aaKnown RBP17.09■□□□□ 0.33
SNX20-202ENST00000330943 BEND3Q5T5X7 828 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
SNX20-202ENST00000330943 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 AGLP35573 1532 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 STK3Q13188 491 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
SNX20-202ENST00000330943 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.33
SNX20-202ENST00000330943 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.33
SNX20-202ENST00000330943 CGNQ9P2M7 1197 aaKnown RBP17.08■□□□□ 0.33
SNX20-202ENST00000330943 SLC27A2O14975 620 aa17.08■□□□□ 0.32
SNX20-202ENST00000330943 ANXA1P04083 346 aa17.08■□□□□ 0.32
SNX20-202ENST00000330943 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
SNX20-202ENST00000330943 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
SNX20-202ENST00000330943 PA2G4Q9UQ80 394 aaKnown RBP17.08■□□□□ 0.32
SNX20-202ENST00000330943 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 PSMA5P28066 241 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
SNX20-202ENST00000330943 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 RBM43Q6ZSC3 357 aaKnown RBP17.07■□□□□ 0.32
SNX20-202ENST00000330943 PTPRUQ92729 1446 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
SNX20-202ENST00000330943 AACSQ86V21 672 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 MAP4K1Q92918 833 aa17.07■□□□□ 0.32
SNX20-202ENST00000330943 NLRP6P59044 892 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 CEP135Q66GS9 1140 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 LMOD2Q6P5Q4 547 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 CHD2O14647 1828 aaKnown RBP17.06■□□□□ 0.32
SNX20-202ENST00000330943 BABAM1Q9NWV8 329 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 DDX41Q9UJV9 622 aaKnown RBP17.06■□□□□ 0.32
SNX20-202ENST00000330943 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
SNX20-202ENST00000330943 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
SNX20-202ENST00000330943 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
SNX20-202ENST00000330943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
SNX20-202ENST00000330943 GOLGA6L19H0YKK7 550 aa17.04■□□□□ 0.32
SNX20-202ENST00000330943 ARID5BQ14865 1188 aa17.04■□□□□ 0.32
SNX20-202ENST00000330943 RPS6KB1P23443 525 aa17.04■□□□□ 0.32
SNX20-202ENST00000330943 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
SNX20-202ENST00000330943 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 USP27XA6NNY8 438 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 RNF20Q5VTR2 975 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 HOXC9P31274 260 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
SNX20-202ENST00000330943 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 KIF18AQ8NI77 898 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
SNX20-202ENST00000330943 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX20-202ENST00000330943 V9GYY5 206 aaPredicted RBP17.03■□□□□ 0.32
SNX20-202ENST00000330943 ADGRL3Q9HAR2 1447 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 JAK2O60674 1132 aa17.03■□□□□ 0.32
SNX20-202ENST00000330943 CDC25BP30305 580 aa17.02■□□□□ 0.32
SNX20-202ENST00000330943 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
SNX20-202ENST00000330943 MTX1Q13505 466 aa17.02■□□□□ 0.32
SNX20-202ENST00000330943 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
SNX20-202ENST00000330943 DDX11Q96FC9 970 aa17.02■□□□□ 0.32
SNX20-202ENST00000330943 ADCY9O60503 1353 aa17.02■□□□□ 0.32
SNX20-202ENST00000330943 HIP1O00291 1037 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms