RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 F13A1P00488 732 aa18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 YEATS4O95619 227 aa18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 TRMT112Q9UI30 125 aaKnown RBP18.38■□□□□ 0.53
MCF2L2-201ENST00000328913 PAFAH1B1P43034 410 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 GNG11P61952 73 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 DACT1Q9NYF0 836 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 IFIT5Q13325 482 aaKnown RBP18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 TRERF1Q96PN7 1200 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 PER1O15534 1290 aaPredicted RBP18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 A0A087WZG4 1122 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 SEPT7Q16181 437 aaKnown RBP18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 FAM107BQ9H098 131 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
MCF2L2-201ENST00000328913 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 USO1O60763 962 aaKnown RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 ZSCAN29Q8IWY8 852 aaPredicted RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 POLR3DP05423 398 aaPredicted RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 ENOX2Q16206 610 aaKnown RBP18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 BRF1Q92994 677 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 PLCD4Q9BRC7 762 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 MAP3K2Q9Y2U5 619 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
MCF2L2-201ENST00000328913 C8orf58Q8NAV2 365 aa18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 MINDY4BA8MYZ0 360 aa18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 DNM1Q05193 864 aaKnown RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 MAP3K12Q12852 859 aa18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 GOLIM4O00461 696 aa18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 TEX13AQ9BXU3 409 aaPredicted RBP18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 KDM2BQ8NHM5 1336 aa18.35■□□□□ 0.53
MCF2L2-201ENST00000328913 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 CACNA2D4Q7Z3S7 1137 aa18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 SEPT11Q9NVA2 429 aaKnown RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 RBM25P49756 843 aaKnown RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 CCDC12Q8WUD4 166 aaPredicted RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 RRAGDQ9NQL2 400 aaPredicted RBP18.34■□□□□ 0.53
MCF2L2-201ENST00000328913 KANK3Q6NY19 840 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.535e-9■■■■■ 167.7
MCF2L2-201ENST00000328913 GPTP24298 496 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 CAVIN4Q5BKX8 364 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 IQCA1Q86XH1 822 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 TIGD1Q96MW7 591 aa18.33■□□□□ 0.53
MCF2L2-201ENST00000328913 VAMP4O75379 141 aa18.33■□□□□ 0.52
MCF2L2-201ENST00000328913 LUZP1Q86V48 1076 aa18.33■□□□□ 0.52
MCF2L2-201ENST00000328913 LMAN1P49257 510 aa18.33■□□□□ 0.52
MCF2L2-201ENST00000328913 TUBB4AP04350 444 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 UBASH3AP57075 661 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 DNAJC25Q9H1X3 360 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 TYRO3Q06418 890 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 ISM2Q6H9L7 571 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 ZRSR2Q15696 482 aaKnown RBP18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 KCNG4Q8TDN1 519 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 TCEANC2Q96MN5 208 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 SYKP43405 635 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
MCF2L2-201ENST00000328913 CCDC94Q9BW85 323 aaPredicted RBP18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 SLU7O95391 586 aaKnown RBP18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 DNAI1Q9UI46 699 aa18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 SNRPA1P09661 255 aaKnown RBP18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 CEP85Q6P2H3 762 aa18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 NCOA7Q8NI08 942 aa18.31■□□□□ 0.52
MCF2L2-201ENST00000328913 TOM1O60784 492 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 ZSWIM4Q9H7M6 989 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 WDR62O43379 1518 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 MICALCLQ6ZW33 695 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 ABCC2Q92887 1545 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 TSG101Q99816 390 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 ANKRD18BA2A2Z9 1011 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 PPFIA3O75145 1194 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 VPS36Q86VN1 386 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 GIMAP7Q8NHV1 300 aa18.3■□□□□ 0.52
MCF2L2-201ENST00000328913 PPP1R12BO60237 982 aaPredicted RBP18.29■□□□□ 0.52
MCF2L2-201ENST00000328913 METAP2P50579 478 aaKnown RBP eCLIP18.29■□□□□ 0.52
MCF2L2-201ENST00000328913 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms