RNA–Protein interactions for RNA: ENST00000326524.6

GDNF-201, Transcript of glial cell derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDNF, Length 3,810 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-201ENST00000326524 NECTIN1Q15223 517 aa13.18□□□□□ -0.3
GDNF-201ENST00000326524 ANKRD1Q15327 319 aa13.18□□□□□ -0.3
GDNF-201ENST00000326524 NR1I2O75469 434 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
GDNF-201ENST00000326524 KIF18AQ8NI77 898 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 KDRP35968 1356 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 PTPN14Q15678 1187 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
GDNF-201ENST00000326524 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
GDNF-201ENST00000326524 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
GDNF-201ENST00000326524 STK3Q13188 491 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 KCNB2Q92953 911 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
GDNF-201ENST00000326524 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
GDNF-201ENST00000326524 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 USP31Q70CQ4 1352 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 CAVIN2O95810 425 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
GDNF-201ENST00000326524 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 USP6P35125 1406 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 NEMFO60524 1076 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 CDC25BP30305 580 aa13.16□□□□□ -0.3
GDNF-201ENST00000326524 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.16□□□□□ -0.3
GDNF-201ENST00000326524 V9GYY5 206 aaPredicted RBP13.16□□□□□ -0.3
GDNF-201ENST00000326524 BECN2A8MW95 431 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 LRRC8AQ8IWT6 810 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 DNAAF4Q8WXU2 420 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 HIP1O00291 1037 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 SLC27A2O14975 620 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
GDNF-201ENST00000326524 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 SKILP12757 684 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
GDNF-201ENST00000326524 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
GDNF-201ENST00000326524 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
GDNF-201ENST00000326524 H3BQV1 296 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
GDNF-201ENST00000326524 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 AACSQ86V21 672 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 MAP4K1Q92918 833 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.14□□□□□ -0.31
GDNF-201ENST00000326524 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
GDNF-201ENST00000326524 MLECQ14165 292 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
GDNF-201ENST00000326524 TRMT1Q9NXH9 659 aaKnown RBP13.14□□□□□ -0.31
GDNF-201ENST00000326524 NRXN3Q9Y4C0 1643 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 RPS6KB1P23443 525 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 TERF2Q15554 542 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 FMN2Q9NZ56 1722 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 TECPR2O15040 1411 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 ERO1AQ96HE7 468 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 C9orf78Q9NZ63 289 aaPredicted RBP13.13□□□□□ -0.31
GDNF-201ENST00000326524 ADGRL3Q9HAR2 1447 aa13.13□□□□□ -0.31
GDNF-201ENST00000326524 CCDC69A6NI79 296 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
GDNF-201ENST00000326524 ELF2Q15723 593 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 STX1AQ16623 288 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 SARM1Q6SZW1 724 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
GDNF-201ENST00000326524 FSD1Q9BTV5 496 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 CHPF2Q9P2E5 772 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
GDNF-201ENST00000326524 CRYBG1Q9Y4K1 1723 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
GDNF-201ENST00000326524 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
GDNF-201ENST00000326524 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
GDNF-201ENST00000326524 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
GDNF-201ENST00000326524 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
GDNF-201ENST00000326524 C11orf57Q6ZUT1 292 aaPredicted RBP13.11□□□□□ -0.31
GDNF-201ENST00000326524 BRF1Q92994 677 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
GDNF-201ENST00000326524 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
GDNF-201ENST00000326524 IQCB1Q15051 598 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 NPHP1O15259 732 aa13.11□□□□□ -0.31
GDNF-201ENST00000326524 CTAGE5O15320 804 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms