RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
ABCF1-201ENST00000326195 ZKSCAN5Q9Y2L8 839 aa12.54□□□□□ -0.4
ABCF1-201ENST00000326195 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 ZBTB22O15209 634 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
ABCF1-201ENST00000326195 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 RFC4P35249 363 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
ABCF1-201ENST00000326195 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
ABCF1-201ENST00000326195 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
ABCF1-201ENST00000326195 ZSCAN23Q3MJ62 389 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 SNX21Q969T3 373 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 CCDC87Q9NVE4 849 aa12.53□□□□□ -0.4
ABCF1-201ENST00000326195 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.4
ABCF1-201ENST00000326195 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.4
ABCF1-201ENST00000326195 MPNDQ8N594 471 aa12.52□□□□□ -0.4
ABCF1-201ENST00000326195 FAM89AQ96GI7 184 aa12.52□□□□□ -0.4
ABCF1-201ENST00000326195 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.4
ABCF1-201ENST00000326195 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.4
ABCF1-201ENST00000326195 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
ABCF1-201ENST00000326195 PROM2Q8N271 834 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
ABCF1-201ENST00000326195 RGS12O14924 1447 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
ABCF1-201ENST00000326195 ZPR1O75312 459 aa12.52□□□□□ -0.41
ABCF1-201ENST00000326195 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
ABCF1-201ENST00000326195 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
ABCF1-201ENST00000326195 HS1BP3Q53T59 392 aa12.51□□□□□ -0.41
ABCF1-201ENST00000326195 SIL1Q9H173 461 aa12.51□□□□□ -0.41
ABCF1-201ENST00000326195 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
ABCF1-201ENST00000326195 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
ABCF1-201ENST00000326195 BCL9O00512 1426 aa12.51□□□□□ -0.41
ABCF1-201ENST00000326195 PDIA6Q15084 440 aa12.51□□□□□ -0.41
ABCF1-201ENST00000326195 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
ABCF1-201ENST00000326195 GLI3P10071 1580 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 NBPF7P0C2Y1 421 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-201ENST00000326195 ZNF445P59923 1031 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 PKP1Q13835 747 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 SRCIN1Q9C0H9 1055 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 A0A087WZG4 1122 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
ABCF1-201ENST00000326195 CRYBG1Q9Y4K1 1723 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-201ENST00000326195 BAG6P46379 1132 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
ABCF1-201ENST00000326195 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
ABCF1-201ENST00000326195 RGPD1P0DJD0 1748 aa12.49□□□□□ -0.41
ABCF1-201ENST00000326195 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
ABCF1-201ENST00000326195 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
ABCF1-201ENST00000326195 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
ABCF1-201ENST00000326195 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
ABCF1-201ENST00000326195 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
ABCF1-201ENST00000326195 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
ABCF1-201ENST00000326195 COL22A1Q8NFW1 1626 aaPredicted RBP12.49□□□□□ -0.41
ABCF1-201ENST00000326195 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 CASC1Q6TDU7 716 aa12.48□□□□□ -0.41
ABCF1-201ENST00000326195 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
ABCF1-201ENST00000326195 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 FAM208AQ9UK61 1670 aaKnown RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 IBTKQ9P2D0 1353 aaPredicted RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 OS9Q13438 667 aaPredicted RBP12.48□□□□□ -0.41
ABCF1-201ENST00000326195 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
ABCF1-201ENST00000326195 LMBRD1Q9NUN5 540 aa12.48□□□□□ -0.41
ABCF1-201ENST00000326195 GOLGA6L22H0YM25 854 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-201ENST00000326195 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-201ENST00000326195 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-201ENST00000326195 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
ABCF1-201ENST00000326195 CSPP1Q1MSJ5 1256 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 C17orf53Q8N3J3 647 aaPredicted RBP12.47□□□□□ -0.41
ABCF1-201ENST00000326195 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 GPT2Q8TD30 523 aa12.47□□□□□ -0.41
ABCF1-201ENST00000326195 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
ABCF1-201ENST00000326195 MYRIPQ8NFW9 859 aa12.46□□□□□ -0.41
ABCF1-201ENST00000326195 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
ABCF1-201ENST00000326195 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
ABCF1-201ENST00000326195 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
ABCF1-201ENST00000326195 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 KIF20AO95235 890 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
ABCF1-201ENST00000326195 ZBTB40Q9NUA8 1239 aa12.45□□□□□ -0.42
ABCF1-201ENST00000326195 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms