RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 PANK2Q9BZ23 570 aa25.86■■□□□ 1.73
LIMS2-201ENST00000324938 TLR7Q9NYK1 1049 aaKnown RBP25.86■■□□□ 1.73
LIMS2-201ENST00000324938 NKX1-1Q15270 411 aaPredicted RBP25.85■■□□□ 1.73
LIMS2-201ENST00000324938 UBE3BQ7Z3V4 1068 aa25.85■■□□□ 1.73
LIMS2-201ENST00000324938 GAS2L3Q86XJ1 694 aa25.85■■□□□ 1.73
LIMS2-201ENST00000324938 KCNB2Q92953 911 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 TOGARAM1Q9Y4F4 1720 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 PTH1RQ03431 593 aa25.84■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF26B4DH59 902 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 IL2RBP14784 551 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 CASP7P55210 303 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF10Q6P3W6 841 aaKnown RBP25.83■■□□□ 1.73
LIMS2-201ENST00000324938 NBPF15Q8N660 670 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 SNRKQ9NRH2 765 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 TNS2Q63HR2 1409 aa25.83■■□□□ 1.73
LIMS2-201ENST00000324938 CCDC171Q6TFL3 1326 aa25.83■■□□□ 1.72
LIMS2-201ENST00000324938 PTPN12Q05209 780 aaKnown RBP25.82■■□□□ 1.72
LIMS2-201ENST00000324938 A0A087WZG4 1122 aa25.82■■□□□ 1.72
LIMS2-201ENST00000324938 ATP5J2-PTCD1G3V325 749 aa25.82■■□□□ 1.72
LIMS2-201ENST00000324938 PTCD1O75127 700 aaKnown RBP25.82■■□□□ 1.72
LIMS2-201ENST00000324938 ZNF335Q9H4Z2 1342 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-201ENST00000324938 FAM43AQ8N2R8 423 aa25.81■■□□□ 1.72
LIMS2-201ENST00000324938 AK2P54819 239 aa25.81■■□□□ 1.72
LIMS2-201ENST00000324938 JARID2Q92833 1246 aaPredicted RBP25.81■■□□□ 1.72
LIMS2-201ENST00000324938 TM6SF1Q9BZW5 370 aa25.8■■□□□ 1.72
LIMS2-201ENST00000324938 NMIQ13287 307 aaPredicted RBP25.79■■□□□ 1.72
LIMS2-201ENST00000324938 BOLA2Q9H3K6 86 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 PRPF40AO75400 957 aaKnown RBP25.79■■□□□ 1.72
LIMS2-201ENST00000324938 NECTIN1Q15223 517 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 LIMCH1Q9UPQ0 1083 aa25.79■■□□□ 1.72
LIMS2-201ENST00000324938 CASTP20810 708 aaKnown RBP25.78■■□□□ 1.72
LIMS2-201ENST00000324938 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 PRPF40BQ6NWY9 871 aaKnown RBP25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FAM227BQ96M60 508 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 RUFY3Q7L099 469 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 FSD1Q9BTV5 496 aa25.78■■□□□ 1.72
LIMS2-201ENST00000324938 ZNF445P59923 1031 aa25.77■■□□□ 1.72
LIMS2-201ENST00000324938 H7C1W4 665 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 FOXD4L5Q5VV16 416 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 FOXD4L4Q8WXT5 416 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 MAP4K1Q92918 833 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 DBNLQ9UJU6 430 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 JCADQ9P266 1359 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 ATP5JP18859 108 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 TFCP2Q12800 502 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 VPS53Q5VIR6 699 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 CAVIN1Q6NZI2 390 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 TTLL7Q6ZT98 887 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 ZSWIM6Q9HCJ5 1215 aa25.76■■□□□ 1.71
LIMS2-201ENST00000324938 RBM8AQ9Y5S9 174 aaKnown RBP25.76■■□□□ 1.71
LIMS2-201ENST00000324938 RPAP1Q9BWH6 1393 aaPredicted RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 A0A0D9SFI3 127 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 GPT2Q8TD30 523 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 JAKMIP1Q96N16 626 aaKnown RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 WDR33Q9C0J8 1336 aaKnown RBP25.75■■□□□ 1.71
LIMS2-201ENST00000324938 RFX7Q2KHR2 1363 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 ADCK5Q3MIX3 580 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 CHAMP1Q96JM3 812 aa25.75■■□□□ 1.71
LIMS2-201ENST00000324938 TCHHQ07283 1943 aa25.74■■□□□ 1.71
LIMS2-201ENST00000324938 ZKSCAN1P17029 563 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 NCLP19338 710 aaKnown RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 FOXO4P98177 505 aa25.74■■□□□ 1.71
LIMS2-201ENST00000324938 CWC25Q9NXE8 425 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-201ENST00000324938 A1BGP04217 495 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN23Q3MJ62 389 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CREB3L3Q68CJ9 461 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 LMBR1LQ6UX01 489 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 DDX54Q8TDD1 881 aaKnown RBP25.73■■□□□ 1.71
LIMS2-201ENST00000324938 STRN4Q9NRL3 753 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CYP46A1Q9Y6A2 500 aa25.73■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.73■■□□□ 1.71
LIMS2-201ENST00000324938 CPA1P15085 419 aa25.72■■□□□ 1.71
LIMS2-201ENST00000324938 PDRG1Q9NUG6 133 aa25.72■■□□□ 1.71
LIMS2-201ENST00000324938 ITGB4P16144 1822 aa25.71■■□□□ 1.71
LIMS2-201ENST00000324938 MBD3O95983 291 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 KCNJ4P48050 445 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 EVA1CP58658 441 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 CCDC191Q8NCU4 936 aa25.7■■□□□ 1.71
LIMS2-201ENST00000324938 ZSCAN31Q96LW9 406 aaPredicted RBP25.7■■□□□ 1.7
LIMS2-201ENST00000324938 SH2B1Q9NRF2 756 aaPredicted RBP25.7■■□□□ 1.7
LIMS2-201ENST00000324938 SLC27A2O14975 620 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 LARGE1O95461 756 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 DBNDD2Q9BQY9 259 aa25.69■■□□□ 1.7
LIMS2-201ENST00000324938 RNF20Q5VTR2 975 aa25.68■■□□□ 1.7
LIMS2-201ENST00000324938 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
LIMS2-201ENST00000324938 ZBTB3Q9H5J0 574 aa25.68■■□□□ 1.7
LIMS2-201ENST00000324938 ZNF589Q86UQ0 364 aaPredicted RBP25.67■■□□□ 1.7
LIMS2-201ENST00000324938 LARP6Q9BRS8 491 aaKnown RBP25.67■■□□□ 1.7
LIMS2-201ENST00000324938 KDM4FA0A1W2PPD8 638 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 PSMA5P28066 241 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 HAUS7Q99871 368 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 SMC3Q9UQE7 1217 aa25.67■■□□□ 1.7
LIMS2-201ENST00000324938 ATG9AQ7Z3C6 839 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 TMOD3Q9NYL9 352 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 CHMP3Q9Y3E7 222 aa25.66■■□□□ 1.7
LIMS2-201ENST00000324938 GPR108Q9NPR9 543 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 964 ms