RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
SCN4B-201ENST00000324727 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SCN4B-201ENST00000324727 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
SCN4B-201ENST00000324727 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
SCN4B-201ENST00000324727 IL13P35225 146 aa13.58□□□□□ -0.23
SCN4B-201ENST00000324727 KSR2Q6VAB6 950 aa13.58□□□□□ -0.23
SCN4B-201ENST00000324727 SETDB2Q96T68 719 aa13.58□□□□□ -0.23
SCN4B-201ENST00000324727 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
SCN4B-201ENST00000324727 IMMTQ16891 758 aaKnown RBP13.58□□□□□ -0.24
SCN4B-201ENST00000324727 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 TERF1P54274 439 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
SCN4B-201ENST00000324727 MAP3K12Q12852 859 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 CTNNA3Q9UI47 895 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 GCC2Q8IWJ2 1684 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 SLC5A1P13866 664 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
SCN4B-201ENST00000324727 METP08581 1390 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 TBC1D9Q6ZT07 1266 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
SCN4B-201ENST00000324727 LRRC2Q9BYS8 371 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
SCN4B-201ENST00000324727 ERCC6L2Q5T890 1561 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
SCN4B-201ENST00000324727 CCDC47Q96A33 483 aaKnown RBP13.57□□□□□ -0.24
SCN4B-201ENST00000324727 DCAF5Q96JK2 942 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
SCN4B-201ENST00000324727 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
SCN4B-201ENST00000324727 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 NSFL1CQ9UNZ2 370 aaKnown RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 IL16Q14005 1332 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 MBD5Q9P267 1494 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 KCNQ3O43525 872 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 SERPINC1P01008 464 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 FEZ1Q99689 392 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 SSBP05455 408 aaKnown RBP eCLIP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 CDC5LQ99459 802 aaKnown RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 TRMT1Q9NXH9 659 aaKnown RBP13.56□□□□□ -0.24
SCN4B-201ENST00000324727 UVSSAQ2YD98 709 aa13.56□□□□□ -0.24
SCN4B-201ENST00000324727 GNPATO15228 680 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
SCN4B-201ENST00000324727 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 NLRP3Q96P20 1036 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 TMOD2Q9NZR1 351 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 LMAN1P49257 510 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SCN4B-201ENST00000324727 CEP57L1Q8IYX8 460 aa13.55□□□□□ -0.24
SCN4B-201ENST00000324727 ZNF496Q96IT1 587 aaPredicted RBP13.55□□□□□ -0.24
SCN4B-201ENST00000324727 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 NOL7Q9UMY1 257 aaKnown RBP13.54□□□□□ -0.24
SCN4B-201ENST00000324727 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
SCN4B-201ENST00000324727 INSRP06213 1382 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 SFPQP23246 707 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN4B-201ENST00000324727 ZNF213O14771 459 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 SDSP20132 328 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
SCN4B-201ENST00000324727 CAMK4Q16566 473 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
SCN4B-201ENST00000324727 MNAT1P51948 309 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 ATP2B3Q16720 1220 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 UGGT1Q9NYU2 1555 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 ANKRD1Q15327 319 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
SCN4B-201ENST00000324727 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
SCN4B-201ENST00000324727 KCNQ4P56696 695 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 TIMM10P62072 90 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
SCN4B-201ENST00000324727 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 TMEM94Q12767 1356 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 DTNBO60941 627 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 NAP1L1P55209 391 aaKnown RBP13.53□□□□□ -0.24
SCN4B-201ENST00000324727 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 WDR78Q5VTH9 848 aa13.53□□□□□ -0.24
SCN4B-201ENST00000324727 TSPOAP1O95153 1857 aa13.52□□□□□ -0.24
SCN4B-201ENST00000324727 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.24
SCN4B-201ENST00000324727 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.24
SCN4B-201ENST00000324727 CDK5RAP3Q96JB5 506 aa13.52□□□□□ -0.24
SCN4B-201ENST00000324727 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
SCN4B-201ENST00000324727 FAM193AP78312 1265 aa13.52□□□□□ -0.25
SCN4B-201ENST00000324727 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
SCN4B-201ENST00000324727 PDE1AP54750 535 aa13.52□□□□□ -0.25
SCN4B-201ENST00000324727 IFIT3O14879 490 aaKnown RBP13.51□□□□□ -0.25
SCN4B-201ENST00000324727 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
SCN4B-201ENST00000324727 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms