RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 NCAPD3P42695 1498 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 SMIM23A6NLE4 172 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 BCAR3O75815 825 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 CCDC192P0DO97 292 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 GTF2A1P52655 376 aaPredicted RBP10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 TXNDC16Q9P2K2 825 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 DNAJC5BQ9UF47 199 aa10.12□□□□□ -0.79
SH3TC2-201ENST00000323829 PAFAH1B1P43034 410 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 MCM2P49736 904 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 ATP2A3Q93084 1043 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 FAM180AQ6UWF9 173 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 CEP112Q8N8E3 955 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 MSH6P52701 1360 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 TIAM1Q13009 1591 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 FOXO3O43524 673 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 SPATA32Q96LK8 384 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 NCOA1Q15788 1441 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 MYO1BO43795 1136 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 HSPA4P34932 840 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 SKAP1Q86WV1 359 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 CXorf38Q8TB03 319 aa10.11□□□□□ -0.79
SH3TC2-201ENST00000323829 STMN1P16949 149 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SPATA17Q96L03 361 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 ZSCAN31Q96LW9 406 aaPredicted RBP10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 IRAK4Q9NWZ3 460 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SUFUQ9UMX1 484 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 A0A1B0GUL7 405 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 PRKAR2BP31323 418 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 RFC4P35249 363 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 PPP2R5DQ14738 602 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 VPS52Q8N1B4 723 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 STMN2Q93045 179 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 FAM169AQ9Y6X4 670 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 PRXQ9BXM0 1461 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 URI1O94763 535 aaPredicted RBP10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 CAMK4Q16566 473 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 CCDC155Q8N6L0 562 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SELENOSQ9BQE4 189 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 LRP2BPQ9P2M1 347 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 GOLGA8AA7E2F4 631 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 GOLGA8BA8MQT2 603 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 PHACTR2O75167 634 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SMIM24O75264 130 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SMTNL1A8MU46 457 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 PPP2R1AP30153 589 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 CALCOCO2Q13137 446 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 AKNAD1Q5T1N1 836 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 NUF2Q9BZD4 464 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 GBP3Q9H0R5 595 aa10.1□□□□□ -0.79
SH3TC2-201ENST00000323829 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 SLC4A1P02730 911 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 ANLNQ9NQW6 1124 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 GAS8O95995 478 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 UAP1Q16222 522 aaPredicted RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 CCDC172P0C7W6 258 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 EEF2P13639 858 aaKnown RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 ACBD5Q5T8D3 534 aaPredicted RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 PPP1R21Q6ZMI0 780 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 CHMP6Q96FZ7 201 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 WWC3Q9ULE0 1092 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 NEK4P51957 841 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 PPFIA1Q13136 1202 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 HSP90AA5PQ58FG0 334 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 CTAGE6Q86UF2 777 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 CCDC50Q8IVM0 306 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 ZHX1Q9UKY1 873 aaPredicted RBP10.09□□□□□ -0.79
SH3TC2-201ENST00000323829 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 PRPHP41219 470 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 KIAA0753Q2KHM9 967 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 VCXQ9H320 206 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 LMTK3Q96Q04 1460 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 MINDY4BA8MYZ0 360 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 HSF2BPO75031 334 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 TACC1O75410 805 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 HSPA1LP34931 641 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 SEC62Q99442 399 aaKnown RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 XAB2Q9HCS7 855 aaKnown RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 ABCF2Q9UG63 623 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 PPFIA2O75334 1257 aa10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 FGFR1OPO95684 399 aaKnown RBP10.08□□□□□ -0.8
SH3TC2-201ENST00000323829 KRT13P13646 458 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms