RNA–Protein interactions for RNA: ENST00000320431.7

AMIGO3-201, Transcript of adhesion molecule with Ig like domain 3, humanhuman

APPRIS P1 BASIC

Gene AMIGO3, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO3-201ENST00000320431 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
AMIGO3-201ENST00000320431 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
AMIGO3-201ENST00000320431 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
AMIGO3-201ENST00000320431 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
AMIGO3-201ENST00000320431 U2SURPO15042 1029 aaKnown RBP16.02■□□□□ 0.16
AMIGO3-201ENST00000320431 ZKSCAN2Q63HK3 967 aa16.02■□□□□ 0.16
AMIGO3-201ENST00000320431 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
AMIGO3-201ENST00000320431 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
AMIGO3-201ENST00000320431 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.15
AMIGO3-201ENST00000320431 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 CHD1LQ86WJ1 897 aa16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 CNPY4Q8N129 248 aa16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 TSR2Q969E8 191 aaKnown RBP16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 AP5Z1O43299 807 aa16.01■□□□□ 0.15
AMIGO3-201ENST00000320431 PAPPAQ13219 1627 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 TRIM27P14373 513 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 KMT5BQ4FZB7 885 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 SMC4Q9NTJ3 1288 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 TRIM66O15016 1216 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 C10orf67Q8IYJ2 551 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 GTF3C6Q969F1 213 aa16■□□□□ 0.15
AMIGO3-201ENST00000320431 NUCB1Q02818 461 aa15.99■□□□□ 0.15
AMIGO3-201ENST00000320431 HDAC1Q13547 482 aaPredicted RBP15.99■□□□□ 0.15
AMIGO3-201ENST00000320431 NEK11Q8NG66 645 aa15.99■□□□□ 0.15
AMIGO3-201ENST00000320431 PSEN1P49768 467 aa15.99■□□□□ 0.15
AMIGO3-201ENST00000320431 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
AMIGO3-201ENST00000320431 MBD3O95983 291 aa15.98■□□□□ 0.15
AMIGO3-201ENST00000320431 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
AMIGO3-201ENST00000320431 TMEM57Q8N5G2 664 aa15.98■□□□□ 0.15
AMIGO3-201ENST00000320431 BTAF1O14981 1849 aa15.98■□□□□ 0.15
AMIGO3-201ENST00000320431 LRMPQ12912 555 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 BMP2KLQ5H9B9 411 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 MARCH10Q8NA82 808 aaPredicted RBP15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 IFT57Q9NWB7 429 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 LY75O60449 1722 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 RREB1Q92766 1687 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 PTGS1P23219 599 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 GTF2A1P52655 376 aaPredicted RBP15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 GPATCH11Q8N954 259 aa15.97■□□□□ 0.15
AMIGO3-201ENST00000320431 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
AMIGO3-201ENST00000320431 TNNT1P13805 278 aa15.96■□□□□ 0.14
AMIGO3-201ENST00000320431 PHKG2P15735 406 aa15.96■□□□□ 0.14
AMIGO3-201ENST00000320431 RABEP1Q15276 862 aa15.95■□□□□ 0.14
AMIGO3-201ENST00000320431 NOL10Q9BSC4 688 aaKnown RBP15.95■□□□□ 0.14
AMIGO3-201ENST00000320431 CCDC112Q8NEF3 446 aa15.95■□□□□ 0.14
AMIGO3-201ENST00000320431 CYP27B1O15528 508 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 FBXO38Q6PIJ6 1188 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 LCMT1Q9UIC8 334 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 UBR2Q8IWV8 1755 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 KDM4AO75164 1064 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 HMOX1P09601 288 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 ILDR2Q71H61 639 aa15.94■□□□□ 0.14
AMIGO3-201ENST00000320431 SYT10Q6XYQ8 523 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 NFATC2IPQ8NCF5 419 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 SYAP1Q96A49 352 aaPredicted RBP15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 NOB1Q9ULX3 412 aaKnown RBP15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 A0A0G2JS52 829 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 ELF2Q15723 593 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 DCAF5Q96JK2 942 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 TSPYL1Q9H0U9 437 aa15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 POLR3GO15318 223 aaPredicted RBP15.93■□□□□ 0.14
AMIGO3-201ENST00000320431 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 CYP2C19P33261 490 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 RASSF4Q9H2L5 321 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 GEMIN8Q9NWZ8 242 aaKnown RBP15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 SMTNL1A8MU46 457 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 NOP2P46087 812 aaKnown RBP15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 GIMAP6Q6P9H5 292 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 USP48Q86UV5 1035 aa15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 CWC22Q9HCG8 908 aaKnown RBP15.92■□□□□ 0.14
AMIGO3-201ENST00000320431 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 ZNF530Q6P9A1 599 aaPredicted RBP15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 SSH1Q8WYL5 1049 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 ZNF446Q9NWS9 450 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 KDM3BQ7LBC6 1761 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 DTNBO60941 627 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 MMP14P50281 582 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 NRBP1Q9UHY1 535 aa15.91■□□□□ 0.14
AMIGO3-201ENST00000320431 CDC45O75419 566 aa15.9■□□□□ 0.14
AMIGO3-201ENST00000320431 EXOSC9Q06265 439 aaKnown RBP15.9■□□□□ 0.14
AMIGO3-201ENST00000320431 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms