RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 NEK4P51957 841 aa12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 CWF19L2Q2TBE0 894 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
LCLAT1-202ENST00000319406 RAD50Q92878 1312 aa12.19□□□□□ -0.46
LCLAT1-202ENST00000319406 CPDO75976 1380 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 MCCP23508 829 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 PDCL2Q8N4E4 241 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 LSG1Q9H089 658 aaKnown RBP12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 GRM8O00222 908 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 ZBTB22O15209 634 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 USP25Q9UHP3 1055 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 MBD3O95983 291 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 ATF3P18847 181 aa12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.18□□□□□ -0.46
LCLAT1-202ENST00000319406 GADD45BO75293 160 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 CNTROBQ8N137 903 aa12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 PA2G4Q9UQ80 394 aaKnown RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 CYP27B1O15528 508 aa12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 GLRX3O76003 335 aaKnown RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 ANKRD7Q92527 254 aa12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 NLRP2Q9NX02 1062 aa12.17□□□□□ -0.46
LCLAT1-202ENST00000319406 SPATA31A3Q5VYP0 1347 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 SASH1O94885 1247 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 ADCY5O95622 1261 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 HDAC5Q9UQL6 1122 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
LCLAT1-202ENST00000319406 BRD1O95696 1058 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 ERC1Q8IUD2 1116 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 CLASRPQ8N2M8 674 aaKnown RBP12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 TTC14Q96N46 770 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 NAP1L2Q9ULW6 460 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 NEURL1BA8MQ27 555 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 SNX14Q9Y5W7 946 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 COL15A1P39059 1388 aa12.15□□□□□ -0.46
LCLAT1-202ENST00000319406 UPF3BQ9BZI7 483 aaKnown RBP12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 CGNQ9P2M7 1197 aaKnown RBP12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 VGLL3A8MV65 326 aa12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 KCNB2Q92953 911 aa12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 METTL22Q9BUU2 404 aaPredicted RBP12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 ARFGEF2Q9Y6D5 1785 aa12.14□□□□□ -0.47
LCLAT1-202ENST00000319406 AIMP1Q12904 312 aaKnown RBP12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 GCKRQ14397 625 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 EAF2Q96CJ1 260 aaPredicted RBP12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 USP16Q9Y5T5 823 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 CHRNA2Q15822 529 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 KCNF1Q9H3M0 494 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 PYCARDQ9ULZ3 195 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 CTIFO43310 598 aaKnown RBP12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 COPS6Q7L5N1 327 aa12.13□□□□□ -0.47
LCLAT1-202ENST00000319406 AP5Z1O43299 807 aa12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 SNRPA1P09661 255 aaKnown RBP12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 CWC27Q6UX04 472 aaKnown RBP12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 KIAA1524Q8TCG1 905 aa12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 PAPPAQ13219 1627 aa12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 RFX5P48382 616 aaPredicted RBP12.12□□□□□ -0.47
LCLAT1-202ENST00000319406 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 MYL6BP14649 208 aa12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 AACSQ86V21 672 aa12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 IFIT2P09913 472 aaKnown RBP12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 PTH1RQ03431 593 aa12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms