RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NLRP5P59047 1200 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 SSH1Q8WYL5 1049 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 ABCC5O15440 1437 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 CLCN1P35523 988 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
EDEM3-201ENST00000318130 CCDC113Q9H0I3 377 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 PKD2L1Q9P0L9 805 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 HFM1A2PYH4 1435 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 ANKRD30BQ9BXX2 1392 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 SPA17Q15506 151 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 TICAM2Q86XR7 235 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
EDEM3-201ENST00000318130 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
EDEM3-201ENST00000318130 ZNF397Q8NF99 534 aaPredicted RBP16.02■□□□□ 0.16
EDEM3-201ENST00000318130 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
EDEM3-201ENST00000318130 GRIN2AQ12879 1464 aa16.02■□□□□ 0.15
EDEM3-201ENST00000318130 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.15
EDEM3-201ENST00000318130 NFATC2IPQ8NCF5 419 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 IFIT3O14879 490 aaKnown RBP16.01■□□□□ 0.15
EDEM3-201ENST00000318130 NEMFO60524 1076 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 UIMC1Q96RL1 719 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 PLEKHH1Q9ULM0 1364 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 LMAN1P49257 510 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 WASF1Q92558 559 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
EDEM3-201ENST00000318130 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 ZNF213O14771 459 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 KIF20AO95235 890 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 BICD1Q96G01 975 aa16.01■□□□□ 0.15
EDEM3-201ENST00000318130 SH2B1Q9NRF2 756 aaPredicted RBP16.01■□□□□ 0.15
EDEM3-201ENST00000318130 KLHL40Q2TBA0 621 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 TMC6Q7Z403 805 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
EDEM3-201ENST00000318130 TOP2BQ02880 1626 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 FCHSD2O94868 740 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 XRCC6P12956 609 aaKnown RBP eCLIP16■□□□□ 0.15
EDEM3-201ENST00000318130 GBP2P32456 591 aaPredicted RBP16■□□□□ 0.15
EDEM3-201ENST00000318130 BEGAINQ9BUH8 593 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 WDR7Q9Y4E6 1490 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 ISM2Q6H9L7 571 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 SMARCC1Q92922 1105 aaPredicted RBP16■□□□□ 0.15
EDEM3-201ENST00000318130 ZNF287Q9HBT7 754 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 SLC12A7Q9Y666 1083 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 ASXL2Q76L83 1435 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 MCM3P25205 808 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 NKTRP30414 1462 aaKnown RBP16■□□□□ 0.15
EDEM3-201ENST00000318130 NF2P35240 595 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 TERF1P54274 439 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
EDEM3-201ENST00000318130 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
EDEM3-201ENST00000318130 GOLGA6L10A0A0M3HER8 536 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 SNW1Q13573 536 aaKnown RBP15.99■□□□□ 0.15
EDEM3-201ENST00000318130 PANK2Q9BZ23 570 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 LIMCH1Q9UPQ0 1083 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 BMS1Q14692 1282 aaKnown RBP15.99■□□□□ 0.15
EDEM3-201ENST00000318130 CEP135Q66GS9 1140 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 SORBS3O60504 671 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 SLF2Q8IX21 1173 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 KIF1BPQ96EK5 621 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 DDX19AQ9NUU7 478 aaKnown RBP15.99■□□□□ 0.15
EDEM3-201ENST00000318130 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
EDEM3-201ENST00000318130 CCNL1Q9UK58 526 aaPredicted RBP15.99■□□□□ 0.15
EDEM3-201ENST00000318130 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TBC1D32Q96NH3 1257 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 STX8Q9UNK0 236 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 BCS1LQ9Y276 419 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 CTAGE5O15320 804 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 GSDMDP57764 484 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TRAPPC3LQ5T215 181 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 LUZP1Q86V48 1076 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.98■□□□□ 0.15
EDEM3-201ENST00000318130 XAGE3Q8WTP9 111 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TBC1D9Q6ZT07 1266 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 ARHGAP27Q6ZUM4 889 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 TIGD1Q96MW7 591 aa15.98■□□□□ 0.15
EDEM3-201ENST00000318130 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 FAM107BQ9H098 131 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
EDEM3-201ENST00000318130 SBNO2Q9Y2G9 1366 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 BIN1O00499 593 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 CYP7A1P22680 504 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 MICALCLQ6ZW33 695 aa15.97■□□□□ 0.15
EDEM3-201ENST00000318130 FSIP1Q8NA03 581 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms