RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 AFDNP55196 1824 aaKnown RBP20.22■□□□□ 0.83
TUBB3-201ENST00000315491 MSH5O43196 834 aa20.22■□□□□ 0.83
TUBB3-201ENST00000315491 NLRP10Q86W26 655 aa20.22■□□□□ 0.83
TUBB3-201ENST00000315491 ANKRD36CQ5JPF3 1778 aa20.22■□□□□ 0.83
TUBB3-201ENST00000315491 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
TUBB3-201ENST00000315491 LRRFIP2Q9Y608 721 aaKnown RBP20.21■□□□□ 0.83
TUBB3-201ENST00000315491 C4AP0C0L4 1744 aa20.21■□□□□ 0.83
TUBB3-201ENST00000315491 UBN2Q6ZU65 1347 aa20.2■□□□□ 0.82
TUBB3-201ENST00000315491 H7C1W4 665 aa20.2■□□□□ 0.82
TUBB3-201ENST00000315491 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
TUBB3-201ENST00000315491 ANO8Q9HCE9 1232 aaPredicted RBP20.2■□□□□ 0.82
TUBB3-201ENST00000315491 STK32BQ9NY57 414 aa20.2■□□□□ 0.82
TUBB3-201ENST00000315491 NIP7Q9Y221 180 aaKnown RBP eCLIP20.2■□□□□ 0.82
TUBB3-201ENST00000315491 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
TUBB3-201ENST00000315491 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
TUBB3-201ENST00000315491 UPF1Q92900 1129 aaKnown RBP eCLIP20.19■□□□□ 0.82
TUBB3-201ENST00000315491 CASP7P55210 303 aa20.18■□□□□ 0.82
TUBB3-201ENST00000315491 SLC15A2Q16348 729 aa20.18■□□□□ 0.82
TUBB3-201ENST00000315491 CEP85Q6P2H3 762 aa20.18■□□□□ 0.82
TUBB3-201ENST00000315491 RPAP2Q8IXW5 612 aaPredicted RBP20.18■□□□□ 0.82
TUBB3-201ENST00000315491 JARID2Q92833 1246 aaPredicted RBP20.18■□□□□ 0.82
TUBB3-201ENST00000315491 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
TUBB3-201ENST00000315491 ANKRD44Q8N8A2 993 aa20.18■□□□□ 0.82
TUBB3-201ENST00000315491 PCCAP05165 728 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-201ENST00000315491 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-201ENST00000315491 TBC1D9BQ66K14 1250 aa20.17■□□□□ 0.82
TUBB3-201ENST00000315491 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-201ENST00000315491 ZBTB38Q8NAP3 1195 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-201ENST00000315491 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
TUBB3-201ENST00000315491 PNPLA7Q6ZV29 1317 aa20.17■□□□□ 0.82
TUBB3-201ENST00000315491 IGHDP01880 384 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 SUSD4Q5VX71 490 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 TUBGCP6Q96RT7 1819 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 GYS1P13807 737 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
TUBB3-201ENST00000315491 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
TUBB3-201ENST00000315491 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
TUBB3-201ENST00000315491 ATP8B2P98198 1209 aa20.15■□□□□ 0.82
TUBB3-201ENST00000315491 PPP1R42Q7Z4L9 355 aa20.15■□□□□ 0.82
TUBB3-201ENST00000315491 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
TUBB3-201ENST00000315491 UTP14AQ9BVJ6 771 aaKnown RBP20.15■□□□□ 0.82
TUBB3-201ENST00000315491 KDM2BQ8NHM5 1336 aa20.14■□□□□ 0.81
TUBB3-201ENST00000315491 SETDB2Q96T68 719 aa20.14■□□□□ 0.81
TUBB3-201ENST00000315491 CDHR2Q9BYE9 1310 aa20.13■□□□□ 0.81
TUBB3-201ENST00000315491 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
TUBB3-201ENST00000315491 BICC1Q9H694 974 aaKnown RBP20.13■□□□□ 0.81
TUBB3-201ENST00000315491 HMMRO75330 724 aa20.13■□□□□ 0.81
TUBB3-201ENST00000315491 NTSR2O95665 410 aa20.13■□□□□ 0.81
TUBB3-201ENST00000315491 EPHA10Q5JZY3 1008 aa20.13■□□□□ 0.81
TUBB3-201ENST00000315491 CENPQQ7L2Z9 268 aaPredicted RBP20.13■□□□□ 0.81
TUBB3-201ENST00000315491 SH3TC1Q8TE82 1336 aa20.12■□□□□ 0.81
TUBB3-201ENST00000315491 NFIXQ14938 502 aa20.12■□□□□ 0.81
TUBB3-201ENST00000315491 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
TUBB3-201ENST00000315491 MTX1Q13505 466 aa20.11■□□□□ 0.81
TUBB3-201ENST00000315491 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
TUBB3-201ENST00000315491 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-201ENST00000315491 FOXO4P98177 505 aa20.11■□□□□ 0.81
TUBB3-201ENST00000315491 RABL6Q3YEC7 729 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-201ENST00000315491 SYNE4Q8N205 404 aa20.11■□□□□ 0.81
TUBB3-201ENST00000315491 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 ILDR2Q71H61 639 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 NYXQ9GZU5 481 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 COL24A1Q17RW2 1714 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 CARMIL3Q8ND23 1372 aa20.1■□□□□ 0.81
TUBB3-201ENST00000315491 POLA2Q14181 598 aa20.09■□□□□ 0.81
TUBB3-201ENST00000315491 NLGN1Q8N2Q7 840 aa20.09■□□□□ 0.81
TUBB3-201ENST00000315491 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
TUBB3-201ENST00000315491 TM4SF1P30408 202 aa20.08■□□□□ 0.81
TUBB3-201ENST00000315491 NBPF5PQ86XG9 351 aaPredicted RBP20.08■□□□□ 0.81
TUBB3-201ENST00000315491 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.81
TUBB3-201ENST00000315491 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.8
TUBB3-201ENST00000315491 PDE8AO60658 829 aa20.07■□□□□ 0.8
TUBB3-201ENST00000315491 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
TUBB3-201ENST00000315491 ERFEQ4G0M1 354 aa20.07■□□□□ 0.8
TUBB3-201ENST00000315491 TPTE2Q6XPS3 522 aa20.07■□□□□ 0.8
TUBB3-201ENST00000315491 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
TUBB3-201ENST00000315491 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
TUBB3-201ENST00000315491 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
TUBB3-201ENST00000315491 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
TUBB3-201ENST00000315491 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
TUBB3-201ENST00000315491 HCLS1P14317 486 aaPredicted RBP20.06■□□□□ 0.8
TUBB3-201ENST00000315491 CSF1RP07333 972 aa20.05■□□□□ 0.8
TUBB3-201ENST00000315491 CTSWP56202 376 aa20.05■□□□□ 0.8
TUBB3-201ENST00000315491 DDR1Q08345 913 aa20.05■□□□□ 0.8
TUBB3-201ENST00000315491 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
TUBB3-201ENST00000315491 SERPINB2P05120 415 aa20.04■□□□□ 0.8
TUBB3-201ENST00000315491 SLC10A5Q5PT55 438 aa20.04■□□□□ 0.8
TUBB3-201ENST00000315491 ABCC12Q96J65 1359 aa20.04■□□□□ 0.8
TUBB3-201ENST00000315491 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
TUBB3-201ENST00000315491 NPHP1O15259 732 aa20.03■□□□□ 0.8
TUBB3-201ENST00000315491 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
TUBB3-201ENST00000315491 CNBD1Q8NA66 436 aa20.03■□□□□ 0.8
TUBB3-201ENST00000315491 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
TUBB3-201ENST00000315491 LAMB2P55268 1798 aa20.02■□□□□ 0.8
TUBB3-201ENST00000315491 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-201ENST00000315491 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.79
TUBB3-201ENST00000315491 SURF6O75683 361 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms