RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.22
MKS1-201ENST00000313863 GOLGA6L4A6NEF3 574 aa16.45■□□□□ 0.22
MKS1-201ENST00000313863 AACSQ86V21 672 aa16.45■□□□□ 0.22
MKS1-201ENST00000313863 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
MKS1-201ENST00000313863 G3BP1Q13283 466 aaKnown RBP eCLIP16.44■□□□□ 0.22
MKS1-201ENST00000313863 AMOTQ4VCS5 1084 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
MKS1-201ENST00000313863 NPHP3Q7Z494 1330 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 CAVIN2O95810 425 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 NUTM2GQ5VZR2 741 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 USHBP1Q8N6Y0 703 aa16.44■□□□□ 0.22
MKS1-201ENST00000313863 SLC27A2O14975 620 aa16.43■□□□□ 0.22
MKS1-201ENST00000313863 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
MKS1-201ENST00000313863 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
MKS1-201ENST00000313863 NFAT5O94916 1531 aa16.43■□□□□ 0.22
MKS1-201ENST00000313863 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
MKS1-201ENST00000313863 TYRO3Q06418 890 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 KRT32Q14532 448 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
MKS1-201ENST00000313863 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
MKS1-201ENST00000313863 MPNDQ8N594 471 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 LGR6Q9HBX8 967 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 UTYO14607 1347 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
MKS1-201ENST00000313863 TTC6Q86TZ1 520 aa16.42■□□□□ 0.22
MKS1-201ENST00000313863 RPS6KB1P23443 525 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 SPATA32Q96LK8 384 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
MKS1-201ENST00000313863 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 GRM8O00222 908 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 NBPF6Q5VWK0 638 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 NBPF4Q96M43 638 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 MRVI1Q9Y6F6 885 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 JCADQ9P266 1359 aa16.4■□□□□ 0.22
MKS1-201ENST00000313863 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
MKS1-201ENST00000313863 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
MKS1-201ENST00000313863 CDC37L1Q7L3B6 337 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 C17orf53Q8N3J3 647 aaPredicted RBP16.39■□□□□ 0.21
MKS1-201ENST00000313863 KCNF1Q9H3M0 494 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
MKS1-201ENST00000313863 AP5Z1O43299 807 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 SPC24Q8NBT2 197 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
MKS1-201ENST00000313863 HEG1Q9ULI3 1381 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
MKS1-201ENST00000313863 RNMTO43148 476 aaKnown RBP16.38■□□□□ 0.21
MKS1-201ENST00000313863 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 FAM227BQ96M60 508 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 PYCARDQ9ULZ3 195 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 MRC1P22897 1456 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 NPHP4O75161 1426 aaPredicted RBP16.38■□□□□ 0.21
MKS1-201ENST00000313863 KCNQ3O43525 872 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 ANXA1P04083 346 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 LIG1P18858 919 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 TDRD7Q8NHU6 1098 aaKnown RBP16.38■□□□□ 0.21
MKS1-201ENST00000313863 DACT1Q9NYF0 836 aa16.38■□□□□ 0.21
MKS1-201ENST00000313863 CEBPAP49715 358 aaPredicted RBP16.37■□□□□ 0.21
MKS1-201ENST00000313863 SYCP1Q15431 976 aa16.37■□□□□ 0.21
MKS1-201ENST00000313863 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
MKS1-201ENST00000313863 FERMT3Q86UX7 667 aa16.37■□□□□ 0.21
MKS1-201ENST00000313863 DRC7Q8IY82 874 aa16.37■□□□□ 0.21
MKS1-201ENST00000313863 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
MKS1-201ENST00000313863 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
MKS1-201ENST00000313863 ZSCAN16Q9H4T2 348 aaPredicted RBP16.37■□□□□ 0.21
MKS1-201ENST00000313863 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
MKS1-201ENST00000313863 MYH15Q9Y2K3 1946 aa16.37■□□□□ 0.21
MKS1-201ENST00000313863 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 SASH1O94885 1247 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 KCNA6P17658 529 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 ANO6Q4KMQ2 910 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 SUCLG2Q96I99 432 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 CBX8Q9HC52 389 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
MKS1-201ENST00000313863 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 CDC25BP30305 580 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
MKS1-201ENST00000313863 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
MKS1-201ENST00000313863 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 CTIFO43310 598 aaKnown RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 ZNF75DP51815 510 aa16.35■□□□□ 0.21
MKS1-201ENST00000313863 NEXNQ0ZGT2 675 aa16.35■□□□□ 0.21
MKS1-201ENST00000313863 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
MKS1-201ENST00000313863 CAMK4Q16566 473 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms