RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 NBPF7P0C2Y1 421 aaPredicted RBP23.58■■□□□ 1.37
CDK4-202ENST00000312990 NIP7Q9Y221 180 aaKnown RBP eCLIP23.58■■□□□ 1.37
CDK4-202ENST00000312990 DDX60Q8IY21 1712 aaKnown RBP23.58■■□□□ 1.37
CDK4-202ENST00000312990 GRM8O00222 908 aa23.57■■□□□ 1.36
CDK4-202ENST00000312990 UTYO14607 1347 aa23.57■■□□□ 1.36
CDK4-202ENST00000312990 C9orf78Q9NZ63 289 aaPredicted RBP23.56■■□□□ 1.36
CDK4-202ENST00000312990 GTF3C3Q9Y5Q9 886 aa23.56■■□□□ 1.36
CDK4-202ENST00000312990 MSH5O43196 834 aa23.55■■□□□ 1.36
CDK4-202ENST00000312990 PDGFDQ9GZP0 370 aaPredicted RBP23.55■■□□□ 1.36
CDK4-202ENST00000312990 CASP7P55210 303 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 PARP10Q53GL7 1025 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 CHMP4BQ9H444 224 aaKnown RBP23.54■■□□□ 1.36
CDK4-202ENST00000312990 C1orf115Q9H7X2 142 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 GNAI3P08754 354 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 SUSD4Q5VX71 490 aa23.54■■□□□ 1.36
CDK4-202ENST00000312990 JARID2Q92833 1246 aaPredicted RBP23.54■■□□□ 1.36
CDK4-202ENST00000312990 NRXN2Q9P2S2 1712 aa23.53■■□□□ 1.36
CDK4-202ENST00000312990 H7C1W4 665 aa23.53■■□□□ 1.36
CDK4-202ENST00000312990 UBTFL1P0CB47 393 aaPredicted RBP23.53■■□□□ 1.36
CDK4-202ENST00000312990 AAMPQ13685 434 aa23.53■■□□□ 1.36
CDK4-202ENST00000312990 NFIXQ14938 502 aa23.53■■□□□ 1.36
CDK4-202ENST00000312990 UBE3BQ7Z3V4 1068 aa23.53■■□□□ 1.36
CDK4-202ENST00000312990 SETDB2Q96T68 719 aa23.52■■□□□ 1.36
CDK4-202ENST00000312990 NTSR2O95665 410 aa23.51■■□□□ 1.35
CDK4-202ENST00000312990 PCCAP05165 728 aaPredicted RBP23.51■■□□□ 1.35
CDK4-202ENST00000312990 RTL5Q5HYW3 569 aaPredicted RBP23.51■■□□□ 1.35
CDK4-202ENST00000312990 ZBTB38Q8NAP3 1195 aaPredicted RBP23.51■■□□□ 1.35
CDK4-202ENST00000312990 TM4SF1P30408 202 aa23.51■■□□□ 1.35
CDK4-202ENST00000312990 FAM89AQ96GI7 184 aa23.51■■□□□ 1.35
CDK4-202ENST00000312990 KAZALD1Q96I82 304 aa23.51■■□□□ 1.35
CDK4-202ENST00000312990 TRMT112Q9UI30 125 aaKnown RBP23.51■■□□□ 1.35
CDK4-202ENST00000312990 PCDHB15Q9Y5E8 787 aa23.51■■□□□ 1.35
CDK4-202ENST00000312990 LRRFIP2Q9Y608 721 aaKnown RBP23.51■■□□□ 1.35
CDK4-202ENST00000312990 CARMIL3Q8ND23 1372 aa23.5■■□□□ 1.35
CDK4-202ENST00000312990 FAM177BA6PVY3 158 aa23.5■■□□□ 1.35
CDK4-202ENST00000312990 GNAI2P04899 355 aa23.5■■□□□ 1.35
CDK4-202ENST00000312990 SYNE4Q8N205 404 aa23.5■■□□□ 1.35
CDK4-202ENST00000312990 PPP1R42Q7Z4L9 355 aa23.49■■□□□ 1.35
CDK4-202ENST00000312990 NLGN1Q8N2Q7 840 aa23.49■■□□□ 1.35
CDK4-202ENST00000312990 SUCLG2Q96I99 432 aa23.49■■□□□ 1.35
CDK4-202ENST00000312990 UTP14AQ9BVJ6 771 aaKnown RBP23.49■■□□□ 1.35
CDK4-202ENST00000312990 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
CDK4-202ENST00000312990 CDHR2Q9BYE9 1310 aa23.48■■□□□ 1.35
CDK4-202ENST00000312990 DDR1Q08345 913 aa23.48■■□□□ 1.35
CDK4-202ENST00000312990 R3HDM1Q15032 1099 aaKnown RBP23.48■■□□□ 1.35
CDK4-202ENST00000312990 ANKRD31Q8N7Z5 1873 aa23.47■■□□□ 1.35
CDK4-202ENST00000312990 SH3TC1Q8TE82 1336 aa23.47■■□□□ 1.35
CDK4-202ENST00000312990 NUTM1Q86Y26 1132 aa23.47■■□□□ 1.35
CDK4-202ENST00000312990 TNRC6CQ9HCJ0 1690 aaKnown RBP23.47■■□□□ 1.35
CDK4-202ENST00000312990 POLRMTO00411 1230 aaKnown RBP23.46■■□□□ 1.35
CDK4-202ENST00000312990 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
CDK4-202ENST00000312990 CEP85Q6P2H3 762 aa23.45■■□□□ 1.34
CDK4-202ENST00000312990 NBPF5PQ86XG9 351 aaPredicted RBP23.45■■□□□ 1.34
CDK4-202ENST00000312990 BICC1Q9H694 974 aaKnown RBP23.45■■□□□ 1.34
CDK4-202ENST00000312990 ABCC12Q96J65 1359 aa23.45■■□□□ 1.34
CDK4-202ENST00000312990 NYXQ9GZU5 481 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 SIRT2Q8IXJ6 389 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 ANKRD44Q8N8A2 993 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 SLC16A10Q8TF71 515 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 PLA2G12BQ9BX93 195 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
CDK4-202ENST00000312990 TAF1P21675 1872 aa23.43■■□□□ 1.34
CDK4-202ENST00000312990 IRS4O14654 1257 aaPredicted RBP23.43■■□□□ 1.34
CDK4-202ENST00000312990 MMP10P09238 476 aa23.43■■□□□ 1.34
CDK4-202ENST00000312990 FOXO4P98177 505 aa23.43■■□□□ 1.34
CDK4-202ENST00000312990 ERFEQ4G0M1 354 aa23.43■■□□□ 1.34
CDK4-202ENST00000312990 HDAC5Q9UQL6 1122 aa23.43■■□□□ 1.34
CDK4-202ENST00000312990 PSDA5PKW4 1024 aaPredicted RBP23.42■■□□□ 1.34
CDK4-202ENST00000312990 SERPINB2P05120 415 aa23.42■■□□□ 1.34
CDK4-202ENST00000312990 TPTE2Q6XPS3 522 aa23.42■■□□□ 1.34
CDK4-202ENST00000312990 RABL6Q3YEC7 729 aaPredicted RBP23.41■■□□□ 1.34
CDK4-202ENST00000312990 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
CDK4-202ENST00000312990 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
CDK4-202ENST00000312990 RPAP2Q8IXW5 612 aaPredicted RBP23.41■■□□□ 1.34
CDK4-202ENST00000312990 CNBD1Q8NA66 436 aa23.41■■□□□ 1.34
CDK4-202ENST00000312990 PNMA6EA0A0J9YXQ4 647 aa23.4■■□□□ 1.34
CDK4-202ENST00000312990 MTX1Q13505 466 aa23.4■■□□□ 1.34
CDK4-202ENST00000312990 CCDC24Q8N4L8 307 aa23.4■■□□□ 1.34
CDK4-202ENST00000312990 SPEF2Q9C093 1822 aa23.4■■□□□ 1.34
CDK4-202ENST00000312990 ATP8B2P98198 1209 aa23.39■■□□□ 1.34
CDK4-202ENST00000312990 SLC10A5Q5PT55 438 aa23.39■■□□□ 1.34
CDK4-202ENST00000312990 RIC1Q4ADV7 1423 aa23.39■■□□□ 1.33
CDK4-202ENST00000312990 PDE8AO60658 829 aa23.38■■□□□ 1.33
CDK4-202ENST00000312990 GTF2E1P29083 439 aaPredicted RBP23.38■■□□□ 1.33
CDK4-202ENST00000312990 B4GALNT3Q6L9W6 998 aa23.38■■□□□ 1.33
CDK4-202ENST00000312990 ZBTB7AO95365 584 aa23.38■■□□□ 1.33
CDK4-202ENST00000312990 LMBR1LQ6UX01 489 aa23.38■■□□□ 1.33
CDK4-202ENST00000312990 PARP3Q9Y6F1 533 aa23.38■■□□□ 1.33
CDK4-202ENST00000312990 KIF13BQ9NQT8 1826 aa23.37■■□□□ 1.33
CDK4-202ENST00000312990 IGHDP01880 384 aa23.37■■□□□ 1.33
CDK4-202ENST00000312990 CTSWP56202 376 aa23.37■■□□□ 1.33
CDK4-202ENST00000312990 HDAC1Q13547 482 aaPredicted RBP23.37■■□□□ 1.33
CDK4-202ENST00000312990 C3orf67Q6ZVT6 689 aa23.37■■□□□ 1.33
CDK4-202ENST00000312990 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
CDK4-202ENST00000312990 COL11A2P13942 1736 aaPredicted RBP23.37■■□□□ 1.33
CDK4-202ENST00000312990 NPHP1O15259 732 aa23.36■■□□□ 1.33
CDK4-202ENST00000312990 SRGAP3O43295 1099 aa23.36■■□□□ 1.33
CDK4-202ENST00000312990 CSF1RP07333 972 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms