RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
USP15-202ENST00000312635 ANKRD44Q8N8A2 993 aa11.34□□□□□ -0.59
USP15-202ENST00000312635 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
USP15-202ENST00000312635 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
USP15-202ENST00000312635 ANKRD36CQ5JPF3 1778 aa11.34□□□□□ -0.59
USP15-202ENST00000312635 HMMRO75330 724 aa11.33□□□□□ -0.59
USP15-202ENST00000312635 NBPF7P0C2Y1 421 aaPredicted RBP11.33□□□□□ -0.59
USP15-202ENST00000312635 CASP7P55210 303 aa11.33□□□□□ -0.59
USP15-202ENST00000312635 UTP14AQ9BVJ6 771 aaKnown RBP11.33□□□□□ -0.59
USP15-202ENST00000312635 SRP68Q9UHB9 627 aaKnown RBP11.33□□□□□ -0.59
USP15-202ENST00000312635 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.59
USP15-202ENST00000312635 ATP8B2P98198 1209 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 MTX1Q13505 466 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 SETDB2Q96T68 719 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 PLA2G12BQ9BX93 195 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 C4AP0C0L4 1744 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 QSER1Q2KHR3 1735 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 NUP98P52948 1817 aa11.33□□□□□ -0.6
USP15-202ENST00000312635 GPTP24298 496 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 CEP85Q6P2H3 762 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 NLGN1Q8N2Q7 840 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 TRMT112Q9UI30 125 aaKnown RBP11.32□□□□□ -0.6
USP15-202ENST00000312635 LRRFIP2Q9Y608 721 aaKnown RBP11.32□□□□□ -0.6
USP15-202ENST00000312635 PNPLA7Q6ZV29 1317 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 GYS1P13807 737 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 SUSD4Q5VX71 490 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 TBC1D9BQ66K14 1250 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 CENPQQ7L2Z9 268 aaPredicted RBP11.32□□□□□ -0.6
USP15-202ENST00000312635 UBE3BQ7Z3V4 1068 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
USP15-202ENST00000312635 SUCLG2Q96I99 432 aa11.32□□□□□ -0.6
USP15-202ENST00000312635 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
USP15-202ENST00000312635 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
USP15-202ENST00000312635 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 NTSR2O95665 410 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
USP15-202ENST00000312635 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
USP15-202ENST00000312635 TM4SF1P30408 202 aa11.3□□□□□ -0.6
USP15-202ENST00000312635 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
USP15-202ENST00000312635 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
USP15-202ENST00000312635 GCC1Q96CN9 775 aa11.3□□□□□ -0.6
USP15-202ENST00000312635 MSH5O43196 834 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 PDE8AO60658 829 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 POLA2Q14181 598 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
USP15-202ENST00000312635 NFIXQ14938 502 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 SLC10A5Q5PT55 438 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 KAZALD1Q96I82 304 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
USP15-202ENST00000312635 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
USP15-202ENST00000312635 IGHDP01880 384 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 FOXO4P98177 505 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
USP15-202ENST00000312635 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 CSF1RP07333 972 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 HSP90AB4PQ58FF6 505 aa11.28□□□□□ -0.6
USP15-202ENST00000312635 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.6
USP15-202ENST00000312635 SRGAP3O43295 1099 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
USP15-202ENST00000312635 SMC5Q8IY18 1101 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 DCTPP1Q9H773 170 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 SERPINB2P05120 415 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 CTSWP56202 376 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 EPHA10Q5JZY3 1008 aa11.27□□□□□ -0.61
USP15-202ENST00000312635 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
USP15-202ENST00000312635 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
USP15-202ENST00000312635 POLRMTO00411 1230 aaKnown RBP11.26□□□□□ -0.61
USP15-202ENST00000312635 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
USP15-202ENST00000312635 NOP58Q9Y2X3 529 aaKnown RBP11.26□□□□□ -0.61
USP15-202ENST00000312635 FAM177BA6PVY3 158 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 RAB11FIP3O75154 756 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 ST5P78524 1137 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
USP15-202ENST00000312635 CNBD1Q8NA66 436 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 NPHP1O15259 732 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
USP15-202ENST00000312635 CCDC152Q4G0S7 254 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 ILDR2Q71H61 639 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 COPRSQ9NQ92 184 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 LAMB2P55268 1798 aa11.25□□□□□ -0.61
USP15-202ENST00000312635 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 ERC1Q8IUD2 1116 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 NLRP3Q96P20 1036 aa11.24□□□□□ -0.61
USP15-202ENST00000312635 RFX5P48382 616 aaPredicted RBP11.24□□□□□ -0.61
USP15-202ENST00000312635 DDR1Q08345 913 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms