RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 TRIM28Q13263 835 aaKnown RBP28.3■■■□□ 2.12
CCDC85B-201ENST00000312579 GCKRQ14397 625 aa28.3■■■□□ 2.12
CCDC85B-201ENST00000312579 RTL5Q5HYW3 569 aaPredicted RBP28.3■■■□□ 2.12
CCDC85B-201ENST00000312579 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
CCDC85B-201ENST00000312579 CCDC191Q8NCU4 936 aa28.29■■■□□ 2.12
CCDC85B-201ENST00000312579 CASZ1Q86V15 1759 aa28.29■■■□□ 2.12
CCDC85B-201ENST00000312579 ZBTB7AO95365 584 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 TM4SF1P30408 202 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 NLGN1Q8N2Q7 840 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 MEIS3Q99687 375 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 USP44Q9H0E7 712 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 DDR1Q08345 913 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 EXOC6Q8TAG9 804 aa28.28■■■□□ 2.12
CCDC85B-201ENST00000312579 ZBTB7BO15156 539 aaPredicted RBP28.26■■■□□ 2.11
CCDC85B-201ENST00000312579 NBPF7P0C2Y1 421 aaPredicted RBP28.26■■■□□ 2.11
CCDC85B-201ENST00000312579 C9orf78Q9NZ63 289 aaPredicted RBP28.26■■■□□ 2.11
CCDC85B-201ENST00000312579 MMP10P09238 476 aa28.25■■■□□ 2.11
CCDC85B-201ENST00000312579 PARP10Q53GL7 1025 aa28.25■■■□□ 2.11
CCDC85B-201ENST00000312579 FAM89AQ96GI7 184 aa28.25■■■□□ 2.11
CCDC85B-201ENST00000312579 GRM8O00222 908 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 NTSR2O95665 410 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 UBE3BQ7Z3V4 1068 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 NUTM1Q86Y26 1132 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 CCDC24Q8N4L8 307 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 UTP14AQ9BVJ6 771 aaKnown RBP28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 TRMT112Q9UI30 125 aaKnown RBP28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 DDX19BQ9UMR2 479 aa28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 ATF5Q9Y2D1 282 aaPredicted RBP28.24■■■□□ 2.11
CCDC85B-201ENST00000312579 POLRMTO00411 1230 aaKnown RBP28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 SLC16A10Q8TF71 515 aa28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 COL24A1Q17RW2 1714 aa28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 CARMIL3Q8ND23 1372 aa28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 H7C1W4 665 aa28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 NBPF5PQ86XG9 351 aaPredicted RBP28.23■■■□□ 2.11
CCDC85B-201ENST00000312579 CASP7P55210 303 aa28.22■■■□□ 2.11
CCDC85B-201ENST00000312579 PPP1R42Q7Z4L9 355 aa28.22■■■□□ 2.11
CCDC85B-201ENST00000312579 ZBTB38Q8NAP3 1195 aaPredicted RBP28.22■■■□□ 2.11
CCDC85B-201ENST00000312579 C1orf115Q9H7X2 142 aa28.22■■■□□ 2.11
CCDC85B-201ENST00000312579 SERPINB2P05120 415 aa28.21■■■□□ 2.11
CCDC85B-201ENST00000312579 PCCAP05165 728 aaPredicted RBP28.2■■■□□ 2.1
CCDC85B-201ENST00000312579 ERFEQ4G0M1 354 aa28.2■■■□□ 2.1
CCDC85B-201ENST00000312579 UTYO14607 1347 aa28.19■■■□□ 2.1
CCDC85B-201ENST00000312579 UBTFL1P0CB47 393 aaPredicted RBP28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 SUCLG2Q96I99 432 aa28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 MTFR1LQ9H019 292 aa28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 ZBTB40Q9NUA8 1239 aa28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 PARP3Q9Y6F1 533 aa28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 PPP4R2Q9NY27 417 aa28.18■■■□□ 2.1
CCDC85B-201ENST00000312579 SH3TC1Q8TE82 1336 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 IBTKQ9P2D0 1353 aaPredicted RBP28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 GNAI3P08754 354 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 HCLS1P14317 486 aaPredicted RBP28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 GTF2E1P29083 439 aaPredicted RBP28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 PRR5LQ6MZQ0 368 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 TPTE2Q6XPS3 522 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 NYXQ9GZU5 481 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 ABCC12Q96J65 1359 aa28.17■■■□□ 2.1
CCDC85B-201ENST00000312579 NPHP1O15259 732 aa28.16■■■□□ 2.1
CCDC85B-201ENST00000312579 EPHA10Q5JZY3 1008 aa28.16■■■□□ 2.1
CCDC85B-201ENST00000312579 CNBD1Q8NA66 436 aa28.16■■■□□ 2.1
CCDC85B-201ENST00000312579 KAZALD1Q96I82 304 aa28.16■■■□□ 2.1
CCDC85B-201ENST00000312579 IRS4O14654 1257 aaPredicted RBP28.15■■■□□ 2.1
CCDC85B-201ENST00000312579 CDHR2Q9BYE9 1310 aa28.13■■■□□ 2.09
CCDC85B-201ENST00000312579 GNAI2P04899 355 aa28.13■■■□□ 2.09
CCDC85B-201ENST00000312579 C3orf67Q6ZVT6 689 aa28.12■■■□□ 2.09
CCDC85B-201ENST00000312579 BICC1Q9H694 974 aaKnown RBP28.12■■■□□ 2.09
CCDC85B-201ENST00000312579 NRXN2Q9P2S2 1712 aa28.1■■■□□ 2.09
CCDC85B-201ENST00000312579 FOXO4P98177 505 aa28.1■■■□□ 2.09
CCDC85B-201ENST00000312579 DDX60Q8IY21 1712 aaKnown RBP28.1■■■□□ 2.09
CCDC85B-201ENST00000312579 ANKRD44Q8N8A2 993 aa28.09■■■□□ 2.09
CCDC85B-201ENST00000312579 CCDC85AQ96PX6 553 aaPredicted RBP28.09■■■□□ 2.09
CCDC85B-201ENST00000312579 CHMP4BQ9H444 224 aaKnown RBP28.09■■■□□ 2.09
CCDC85B-201ENST00000312579 PTGER2P43116 358 aa28.08■■■□□ 2.09
CCDC85B-201ENST00000312579 ST5P78524 1137 aa28.08■■■□□ 2.09
CCDC85B-201ENST00000312579 SLC10A5Q5PT55 438 aa28.08■■■□□ 2.09
CCDC85B-201ENST00000312579 SGIP1Q9BQI5 828 aa28.08■■■□□ 2.09
CCDC85B-201ENST00000312579 PCDHB15Q9Y5E8 787 aa28.08■■■□□ 2.09
CCDC85B-201ENST00000312579 POLD1P28340 1107 aa28.08■■■□□ 2.08
CCDC85B-201ENST00000312579 PDE8AO60658 829 aa28.07■■■□□ 2.08
CCDC85B-201ENST00000312579 PLA2G12BQ9BX93 195 aa28.07■■■□□ 2.08
CCDC85B-201ENST00000312579 TNRC6CQ9HCJ0 1690 aaKnown RBP28.07■■■□□ 2.08
CCDC85B-201ENST00000312579 LMBR1LQ6UX01 489 aa28.06■■■□□ 2.08
CCDC85B-201ENST00000312579 CTSWP56202 376 aa28.05■■■□□ 2.08
CCDC85B-201ENST00000312579 CEP85Q6P2H3 762 aa28.05■■■□□ 2.08
CCDC85B-201ENST00000312579 CHMP3Q9Y3E7 222 aa28.04■■■□□ 2.08
CCDC85B-201ENST00000312579 LAMB2P55268 1798 aa28.04■■■□□ 2.08
CCDC85B-201ENST00000312579 SIRT2Q8IXJ6 389 aa28.03■■■□□ 2.08
CCDC85B-201ENST00000312579 TTLL11Q8NHH1 800 aa28.03■■■□□ 2.08
CCDC85B-201ENST00000312579 SPON1Q9HCB6 807 aa28.03■■■□□ 2.08
CCDC85B-201ENST00000312579 ANKRD31Q8N7Z5 1873 aa28.03■■■□□ 2.08
CCDC85B-201ENST00000312579 PNMA6EA0A0J9YXQ4 647 aa28.02■■■□□ 2.08
CCDC85B-201ENST00000312579 RABL6Q3YEC7 729 aaPredicted RBP28.02■■■□□ 2.08
CCDC85B-201ENST00000312579 NLRP3Q96P20 1036 aa28.02■■■□□ 2.08
CCDC85B-201ENST00000312579 HDAC5Q9UQL6 1122 aa28.02■■■□□ 2.08
CCDC85B-201ENST00000312579 BRIP1Q9BX63 1249 aa28.02■■■□□ 2.08
CCDC85B-201ENST00000312579 CSF1RP07333 972 aa28.01■■■□□ 2.07
CCDC85B-201ENST00000312579 FAM161AQ3B820 660 aa28.01■■■□□ 2.07
CCDC85B-201ENST00000312579 GREM2Q9H772 168 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms