RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
RTP1-201ENST00000312295 H7C1W4 665 aa18.64■□□□□ 0.57
RTP1-201ENST00000312295 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
RTP1-201ENST00000312295 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.57
RTP1-201ENST00000312295 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
RTP1-201ENST00000312295 NHSQ6T4R5 1651 aa18.64■□□□□ 0.57
RTP1-201ENST00000312295 CDC45O75419 566 aa18.64■□□□□ 0.57
RTP1-201ENST00000312295 FOXO4P98177 505 aa18.64■□□□□ 0.57
RTP1-201ENST00000312295 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
RTP1-201ENST00000312295 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
RTP1-201ENST00000312295 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
RTP1-201ENST00000312295 COL5A3P25940 1745 aaPredicted RBP18.63■□□□□ 0.57
RTP1-201ENST00000312295 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 SASH1O94885 1247 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
RTP1-201ENST00000312295 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
RTP1-201ENST00000312295 HSP90AB4PQ58FF6 505 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 ANKRD36CQ5JPF3 1778 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 NUP98P52948 1817 aa18.62■□□□□ 0.57
RTP1-201ENST00000312295 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 RFX5P48382 616 aaPredicted RBP18.61■□□□□ 0.57
RTP1-201ENST00000312295 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
RTP1-201ENST00000312295 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 TUBGCP6Q96RT7 1819 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 UBN2Q6ZU65 1347 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
RTP1-201ENST00000312295 AACSQ86V21 672 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
RTP1-201ENST00000312295 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
RTP1-201ENST00000312295 NLRP10Q86W26 655 aa18.6■□□□□ 0.57
RTP1-201ENST00000312295 CLASRPQ8N2M8 674 aaKnown RBP18.6■□□□□ 0.57
RTP1-201ENST00000312295 ZNF594Q96JF6 807 aaPredicted RBP18.6■□□□□ 0.57
RTP1-201ENST00000312295 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
RTP1-201ENST00000312295 RREB1Q92766 1687 aa18.6■□□□□ 0.57
RTP1-201ENST00000312295 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
RTP1-201ENST00000312295 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
RTP1-201ENST00000312295 COL15A1P39059 1388 aa18.59■□□□□ 0.57
RTP1-201ENST00000312295 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.57
RTP1-201ENST00000312295 SBF2Q86WG5 1849 aa18.58■□□□□ 0.56
RTP1-201ENST00000312295 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
RTP1-201ENST00000312295 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
RTP1-201ENST00000312295 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.56
RTP1-201ENST00000312295 STAP2Q9UGK3 403 aa18.58■□□□□ 0.56
RTP1-201ENST00000312295 TRMT112Q9UI30 125 aaKnown RBP18.57■□□□□ 0.56
RTP1-201ENST00000312295 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
RTP1-201ENST00000312295 TFCP2Q12800 502 aa18.57■□□□□ 0.56
RTP1-201ENST00000312295 ZBTB38Q8NAP3 1195 aaPredicted RBP18.57■□□□□ 0.56
RTP1-201ENST00000312295 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
RTP1-201ENST00000312295 CCNL1Q9UK58 526 aaPredicted RBP18.57■□□□□ 0.56
RTP1-201ENST00000312295 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
RTP1-201ENST00000312295 PCCAP05165 728 aaPredicted RBP18.56■□□□□ 0.56
RTP1-201ENST00000312295 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
RTP1-201ENST00000312295 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
RTP1-201ENST00000312295 TRIM28Q13263 835 aaKnown RBP18.55■□□□□ 0.56
RTP1-201ENST00000312295 ERVV-1B6SEH8 477 aa18.55■□□□□ 0.56
RTP1-201ENST00000312295 ERICH6Q7L0X2 663 aa18.55■□□□□ 0.56
RTP1-201ENST00000312295 DDRGK1Q96HY6 314 aa18.55■□□□□ 0.56
RTP1-201ENST00000312295 LRRC24Q50LG9 513 aa18.54■□□□□ 0.56
RTP1-201ENST00000312295 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
RTP1-201ENST00000312295 PUS3Q9BZE2 481 aaKnown RBP18.54■□□□□ 0.56
RTP1-201ENST00000312295 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
RTP1-201ENST00000312295 GNPATO15228 680 aa18.53■□□□□ 0.56
RTP1-201ENST00000312295 SUSD4Q5VX71 490 aa18.53■□□□□ 0.56
RTP1-201ENST00000312295 AOX1Q06278 1338 aa18.53■□□□□ 0.56
RTP1-201ENST00000312295 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
RTP1-201ENST00000312295 ZNF34Q8IZ26 560 aa18.53■□□□□ 0.56
RTP1-201ENST00000312295 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
RTP1-201ENST00000312295 AK9Q5TCS8 1911 aa18.52■□□□□ 0.56
RTP1-201ENST00000312295 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
RTP1-201ENST00000312295 ECHDC1Q9NTX5 307 aa18.52■□□□□ 0.56
RTP1-201ENST00000312295 BCORQ6W2J9 1755 aa18.52■□□□□ 0.56
RTP1-201ENST00000312295 PHF14O94880 888 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
RTP1-201ENST00000312295 CCDC57Q2TAC2 916 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 ATG9AQ7Z3C6 839 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 KRT27Q7Z3Y8 459 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 GREM2Q9H772 168 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 LY75O60449 1722 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 TRIM37O94972 964 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 SRP68Q9UHB9 627 aaKnown RBP18.51■□□□□ 0.55
RTP1-201ENST00000312295 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
RTP1-201ENST00000312295 CTSWP56202 376 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 GPATCH3Q96I76 525 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 IL25Q9H293 177 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 DBNLQ9UJU6 430 aaKnown RBP18.5■□□□□ 0.55
RTP1-201ENST00000312295 NDUFB9Q9Y6M9 179 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 TTC41PQ6P2S7 1318 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
RTP1-201ENST00000312295 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
RTP1-201ENST00000312295 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
RTP1-201ENST00000312295 GLRX3O76003 335 aaKnown RBP18.49■□□□□ 0.55
RTP1-201ENST00000312295 DBNDD2Q9BQY9 259 aa18.49■□□□□ 0.55
RTP1-201ENST00000312295 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
RTP1-201ENST00000312295 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
RTP1-201ENST00000312295 TAF1LQ8IZX4 1826 aa18.49■□□□□ 0.55
RTP1-201ENST00000312295 MYH3P11055 1940 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms