RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 OFD1O75665 1012 aa30.38■■■□□ 2.45
HOXB3-201ENST00000311626 TPCN1Q9ULQ1 816 aa30.38■■■□□ 2.45
HOXB3-201ENST00000311626 CCDC9Q9Y3X0 531 aaKnown RBP30.38■■■□□ 2.45
HOXB3-201ENST00000311626 VPS53Q5VIR6 699 aa30.37■■■□□ 2.45
HOXB3-201ENST00000311626 MTMR6Q9Y217 621 aa30.36■■■□□ 2.45
HOXB3-201ENST00000311626 R3HCC1Q9Y3T6 440 aaKnown RBP30.36■■■□□ 2.45
HOXB3-201ENST00000311626 PTMAP06454 111 aaKnown RBP30.36■■■□□ 2.45
HOXB3-201ENST00000311626 USP16Q9Y5T5 823 aa30.36■■■□□ 2.45
HOXB3-201ENST00000311626 HS1BP3Q53T59 392 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 FAM173BQ6P4H8 233 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 FERMT3Q86UX7 667 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 CABLES1Q8TDN4 633 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 ZNF496Q96IT1 587 aaPredicted RBP30.35■■■□□ 2.45
HOXB3-201ENST00000311626 NEURL1BA8MQ27 555 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 SLC27A2O14975 620 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 ZNF589Q86UQ0 364 aaPredicted RBP30.35■■■□□ 2.45
HOXB3-201ENST00000311626 PROSER2Q86WR7 435 aaPredicted RBP30.35■■■□□ 2.45
HOXB3-201ENST00000311626 RAPGEF4Q8WZA2 1011 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 ZKSCAN5Q9Y2L8 839 aa30.35■■■□□ 2.45
HOXB3-201ENST00000311626 HCLS1P14317 486 aaPredicted RBP30.34■■■□□ 2.45
HOXB3-201ENST00000311626 ZKSCAN1P17029 563 aaPredicted RBP30.34■■■□□ 2.45
HOXB3-201ENST00000311626 CHMP3Q9Y3E7 222 aa30.34■■■□□ 2.45
HOXB3-201ENST00000311626 CRYBG1Q9Y4K1 1723 aa30.34■■■□□ 2.45
HOXB3-201ENST00000311626 NCAPD2Q15021 1401 aa30.34■■■□□ 2.45
HOXB3-201ENST00000311626 ERBB3P21860 1342 aa30.34■■■□□ 2.45
HOXB3-201ENST00000311626 USP25Q9UHP3 1055 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 RGPD5Q99666 1765 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 CCDC183Q5T5S1 534 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 GIMAP6Q6P9H5 292 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 TMEM87AQ8NBN3 555 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 MAP4K1Q92918 833 aa30.33■■■□□ 2.45
HOXB3-201ENST00000311626 ZNF830Q96NB3 372 aaPredicted RBP30.33■■■□□ 2.45
HOXB3-201ENST00000311626 ATP5J2-PTCD1G3V325 749 aa30.32■■■□□ 2.44
HOXB3-201ENST00000311626 PTCD1O75127 700 aaKnown RBP30.32■■■□□ 2.44
HOXB3-201ENST00000311626 GCKRQ14397 625 aa30.32■■■□□ 2.44
HOXB3-201ENST00000311626 SLC52A2Q9HAB3 445 aa30.32■■■□□ 2.44
HOXB3-201ENST00000311626 STK3Q13188 491 aa30.32■■■□□ 2.44
HOXB3-201ENST00000311626 LARP1Q6PKG0 1096 aaKnown RBP30.32■■■□□ 2.44
HOXB3-201ENST00000311626 UTYO14607 1347 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 PHF14O94880 888 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 UBE2HP62256 183 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 NEXNQ0ZGT2 675 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 CHRNA2Q15822 529 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 CCDC39Q9UFE4 941 aa30.31■■■□□ 2.44
HOXB3-201ENST00000311626 KCNB2Q92953 911 aa30.3■■■□□ 2.44
HOXB3-201ENST00000311626 HDAC5Q9UQL6 1122 aa30.3■■■□□ 2.44
HOXB3-201ENST00000311626 CSB-PGBD3P0DP91 1061 aa30.29■■■□□ 2.44
HOXB3-201ENST00000311626 TM6SF1Q9BZW5 370 aa30.29■■■□□ 2.44
HOXB3-201ENST00000311626 NPHP3Q7Z494 1330 aa30.29■■■□□ 2.44
HOXB3-201ENST00000311626 KDM6AO15550 1401 aaPredicted RBP30.29■■■□□ 2.44
HOXB3-201ENST00000311626 PLCB2Q00722 1185 aa30.28■■■□□ 2.44
HOXB3-201ENST00000311626 SLIT3O75094 1523 aa30.28■■■□□ 2.44
HOXB3-201ENST00000311626 ZNF500O60304 480 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-201ENST00000311626 PHKG2P15735 406 aa30.28■■■□□ 2.44
HOXB3-201ENST00000311626 PDZRN4Q6ZMN7 1036 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-201ENST00000311626 ZSCAN31Q96LW9 406 aaPredicted RBP30.28■■■□□ 2.44
HOXB3-201ENST00000311626 TFCP2Q12800 502 aa30.27■■■□□ 2.44
HOXB3-201ENST00000311626 HSP90AA2PQ14568 343 aaPredicted RBP30.27■■■□□ 2.44
HOXB3-201ENST00000311626 UBE3BQ7Z3V4 1068 aa30.27■■■□□ 2.44
HOXB3-201ENST00000311626 LARP1BQ659C4 914 aaKnown RBP30.27■■■□□ 2.44
HOXB3-201ENST00000311626 CCDC129Q6ZRS4 1044 aa30.27■■■□□ 2.44
HOXB3-201ENST00000311626 CDC37L1Q7L3B6 337 aa30.27■■■□□ 2.44
HOXB3-201ENST00000311626 METTL22Q9BUU2 404 aaPredicted RBP30.27■■■□□ 2.44
HOXB3-201ENST00000311626 SH2B1Q9NRF2 756 aaPredicted RBP30.27■■■□□ 2.44
HOXB3-201ENST00000311626 ANKRD13DQ6ZTN6 518 aa30.26■■■□□ 2.44
HOXB3-201ENST00000311626 NPHP4O75161 1426 aaPredicted RBP30.26■■■□□ 2.44
HOXB3-201ENST00000311626 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP30.26■■■□□ 2.43
HOXB3-201ENST00000311626 PHRF1Q9P1Y6 1649 aaKnown RBP30.26■■■□□ 2.43
HOXB3-201ENST00000311626 TATP17735 454 aaPredicted RBP30.26■■■□□ 2.43
HOXB3-201ENST00000311626 SEC62Q99442 399 aaKnown RBP30.26■■■□□ 2.43
HOXB3-201ENST00000311626 DBNLQ9UJU6 430 aaKnown RBP30.26■■■□□ 2.43
HOXB3-201ENST00000311626 BLOC1S2Q6QNY1 142 aa30.25■■■□□ 2.43
HOXB3-201ENST00000311626 DNAJC2Q99543 621 aaKnown RBP30.25■■■□□ 2.43
HOXB3-201ENST00000311626 ATP6V1DQ9Y5K8 247 aa30.25■■■□□ 2.43
HOXB3-201ENST00000311626 SLFNL1Q499Z3 407 aa30.24■■■□□ 2.43
HOXB3-201ENST00000311626 OVOS2A0A0G2JMS6 1433 aa30.23■■■□□ 2.43
HOXB3-201ENST00000311626 TPM2P07951 284 aa30.23■■■□□ 2.43
HOXB3-201ENST00000311626 RBM10P98175 930 aaKnown RBP30.23■■■□□ 2.43
HOXB3-201ENST00000311626 HIP1O00291 1037 aa30.22■■■□□ 2.43
HOXB3-201ENST00000311626 ADCY5O95622 1261 aa30.22■■■□□ 2.43
HOXB3-201ENST00000311626 C5P01031 1676 aa30.22■■■□□ 2.43
HOXB3-201ENST00000311626 PTPN12Q05209 780 aaKnown RBP30.22■■■□□ 2.43
HOXB3-201ENST00000311626 TOB2Q14106 344 aaPredicted RBP30.22■■■□□ 2.43
HOXB3-201ENST00000311626 TFIP11Q9UBB9 837 aaKnown RBP30.22■■■□□ 2.43
HOXB3-201ENST00000311626 SIPA1L3O60292 1781 aaPredicted RBP30.21■■■□□ 2.43
HOXB3-201ENST00000311626 COL15A1P39059 1388 aa30.21■■■□□ 2.43
HOXB3-201ENST00000311626 TTC5Q8N0Z6 440 aa30.21■■■□□ 2.43
HOXB3-201ENST00000311626 DBNDD2Q9BQY9 259 aa30.21■■■□□ 2.43
HOXB3-201ENST00000311626 CYP27B1O15528 508 aa30.21■■■□□ 2.43
HOXB3-201ENST00000311626 C17orf53Q8N3J3 647 aaPredicted RBP30.21■■■□□ 2.43
HOXB3-201ENST00000311626 MEGF6O75095 1541 aa30.2■■■□□ 2.43
HOXB3-201ENST00000311626 RPS6KB1P23443 525 aa30.2■■■□□ 2.43
HOXB3-201ENST00000311626 PSMA5P28066 241 aa30.2■■■□□ 2.43
HOXB3-201ENST00000311626 TTC6Q86TZ1 520 aa30.2■■■□□ 2.43
HOXB3-201ENST00000311626 TAF5LO75529 589 aa30.2■■■□□ 2.42
HOXB3-201ENST00000311626 RFX5P48382 616 aaPredicted RBP30.2■■■□□ 2.42
HOXB3-201ENST00000311626 TNNI3KQ59H18 835 aa30.2■■■□□ 2.42
HOXB3-201ENST00000311626 LRP10Q7Z4F1 713 aa30.2■■■□□ 2.42
HOXB3-201ENST00000311626 FPGT-TNNI3KV9GXZ4 949 aa30.2■■■□□ 2.42
HOXB3-201ENST00000311626 A0A087WZG4 1122 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms