RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 PAFAH1B1P43034 410 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 SSX2IPQ9Y2D8 614 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 ACTN2P35609 894 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 PLCG2P16885 1265 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 PRPHP41219 470 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.32
VCPIP1-201ENST00000310421 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 TRPM2O94759 1503 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 UQCRFS1P1P0C7P4 283 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 NLRP5P59047 1200 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 RFC4P35249 363 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 CCDC85AQ96PX6 553 aaPredicted RBP13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 UHRF1BP1LA0JNW5 1464 aa13.02□□□□□ -0.33
VCPIP1-201ENST00000310421 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 WDR78Q5VTH9 848 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 HDAC9Q9UKV0 1011 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 PAXIP1Q6ZW49 1069 aaPredicted RBP13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 FERP16591 822 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 ABCC1P33527 1531 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 SYCE3A1L190 88 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 NCOA7Q8NI08 942 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 ECHDC1Q9NTX5 307 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 FLIIQ13045 1269 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
VCPIP1-201ENST00000310421 KIAA0556O60303 1618 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 UQCRHP07919 91 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 CTNNBL1Q8WYA6 563 aaPredicted RBP13□□□□□ -0.33
VCPIP1-201ENST00000310421 ZSCAN16Q9H4T2 348 aaPredicted RBP13□□□□□ -0.33
VCPIP1-201ENST00000310421 EXOC1Q9NV70 894 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 C6orf229H3BNL8 230 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 COMMD10Q9Y6G5 202 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 MCM5P33992 734 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 FILIP1Q7Z7B0 1213 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 SAMM50Q9Y512 469 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 ARHGEF12Q9NZN5 1544 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 TSPOAP1O95153 1857 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 SNRPA1P09661 255 aaKnown RBP13□□□□□ -0.33
VCPIP1-201ENST00000310421 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
VCPIP1-201ENST00000310421 FSD2A1L4K1 749 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 CLIP2Q9UDT6 1046 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 PPM1FP49593 454 aaPredicted RBP13□□□□□ -0.33
VCPIP1-201ENST00000310421 RTL9Q8NET4 1388 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 GNAQP50148 359 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
VCPIP1-201ENST00000310421 OGFOD1Q8N543 542 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 AMOTL2Q9Y2J4 779 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 MACROD2A1Z1Q3 448 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 SSH1Q8WYL5 1049 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 UGGT2Q9NYU1 1516 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 MCM4P33991 863 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 SYNCQ9H7C4 482 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 RASAL2Q9UJF2 1139 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 NPHP3Q7Z494 1330 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 UBA7P41226 1012 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 BICD1Q96G01 975 aa12.99□□□□□ -0.33
VCPIP1-201ENST00000310421 MTIF2P46199 727 aaKnown RBP12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 GOPCQ9HD26 462 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 GNAT2P19087 354 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 CAMK4Q16566 473 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 TDRD12Q587J7 1177 aaKnown RBP12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 ZSCAN30Q86W11 494 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 ADAMTS12P58397 1594 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 SPECC1LQ69YQ0 1117 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
VCPIP1-201ENST00000310421 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
VCPIP1-201ENST00000310421 IARSP41252 1262 aaKnown RBP12.97□□□□□ -0.33
VCPIP1-201ENST00000310421 CHMP4BP1P59074 171 aa12.97□□□□□ -0.33
VCPIP1-201ENST00000310421 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
VCPIP1-201ENST00000310421 BMP2KLQ5H9B9 411 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms