RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
SPIRE1-201ENST00000309836 GLI3P10071 1580 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 SNRKQ9NRH2 765 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.524e-6■□□□□ 9.9
SPIRE1-201ENST00000309836 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 SYT1P21579 422 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.29■□□□□ 0.52
SPIRE1-201ENST00000309836 STX6O43752 255 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 ZSCAN30Q86W11 494 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 NAP1L5Q96NT1 182 aaPredicted RBP18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 SMC3Q9UQE7 1217 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
SPIRE1-201ENST00000309836 TCHHQ07283 1943 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 A0A0D9SFI3 127 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 HIP1O00291 1037 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 CYP27B1O15528 508 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 CCDC83Q8IWF9 413 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
SPIRE1-201ENST00000309836 AFDNP55196 1824 aaKnown RBP18.27■□□□□ 0.51
SPIRE1-201ENST00000309836 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 PIP4K2AP48426 406 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 BOLA2Q9H3K6 86 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 MED23Q9ULK4 1368 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 ARFGEF2Q9Y6D5 1785 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 SLC27A2O14975 620 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 F13A1P00488 732 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 SYAP1Q96A49 352 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 ZSCAN31Q96LW9 406 aaPredicted RBP18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
SPIRE1-201ENST00000309836 DTNBO60941 627 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 ATF3P18847 181 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 JCADQ9P266 1359 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 TNS3Q68CZ2 1445 aa18.25■□□□□ 0.51
SPIRE1-201ENST00000309836 GJB2P29033 226 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 SH2B1Q9NRF2 756 aaPredicted RBP18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 LAMB4A4D0S4 1761 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 ME3Q16798 604 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 COPRSQ9NQ92 184 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 MTMR6Q9Y217 621 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 COL15A1P39059 1388 aa18.24■□□□□ 0.51
SPIRE1-201ENST00000309836 DCCP43146 1447 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 ZKSCAN1P17029 563 aaPredicted RBP18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 RNF214Q8ND24 703 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 TPCN1Q9ULQ1 816 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
SPIRE1-201ENST00000309836 PARP4Q9UKK3 1724 aaKnown RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 KCNJ4P48050 445 aa18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 EDC3Q96F86 508 aaKnown RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 RABL6Q3YEC7 729 aaPredicted RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 ZNF589Q86UQ0 364 aaPredicted RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 NECAB1Q8N987 351 aa18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
SPIRE1-201ENST00000309836 CASP7P55210 303 aa18.21■□□□□ 0.51
SPIRE1-201ENST00000309836 TFCP2Q12800 502 aa18.21■□□□□ 0.51
SPIRE1-201ENST00000309836 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
SPIRE1-201ENST00000309836 PHF14O94880 888 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 ATP5JP18859 108 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 TNNI3KQ59H18 835 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 CCDC183Q5T5S1 534 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 FPGT-TNNI3KV9GXZ4 949 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 ATP5J2-PTCD1G3V325 749 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 UBE2HP62256 183 aa18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 NOL7Q9UMY1 257 aaKnown RBP18.2■□□□□ 0.5
SPIRE1-201ENST00000309836 FIBPO43427 364 aa18.19■□□□□ 0.5
SPIRE1-201ENST00000309836 PSMA5P28066 241 aa18.19■□□□□ 0.5
SPIRE1-201ENST00000309836 CABP4P57796 275 aa18.19■□□□□ 0.5
SPIRE1-201ENST00000309836 CPDO75976 1380 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 TAF5LO75529 589 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 RPS6KB1P23443 525 aa18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 MSNP26038 577 aaKnown RBP18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 DNM1Q05193 864 aaKnown RBP18.18■□□□□ 0.5
SPIRE1-201ENST00000309836 ALDH8A1Q9H2A2 487 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms