RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
EIF3F-201ENST00000309828 ZNF34Q8IZ26 560 aa17.46■□□□□ 0.39
EIF3F-201ENST00000309828 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.39
EIF3F-201ENST00000309828 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
EIF3F-201ENST00000309828 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
EIF3F-201ENST00000309828 NUP98P52948 1817 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
EIF3F-201ENST00000309828 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 FOXO4P98177 505 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 C8orf34Q49A92 452 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 PARP10Q53GL7 1025 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 PLEKHM2Q8IWE5 1019 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
EIF3F-201ENST00000309828 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
EIF3F-201ENST00000309828 OSBPL3Q9H4L5 887 aa17.43■□□□□ 0.38
EIF3F-201ENST00000309828 C4BP0C0L5 1744 aa17.43■□□□□ 0.38
EIF3F-201ENST00000309828 APBB1O00213 710 aa17.42■□□□□ 0.38
EIF3F-201ENST00000309828 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
EIF3F-201ENST00000309828 TRIM37O94972 964 aa17.42■□□□□ 0.38
EIF3F-201ENST00000309828 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
EIF3F-201ENST00000309828 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
EIF3F-201ENST00000309828 AK7Q96M32 723 aa17.42■□□□□ 0.38
EIF3F-201ENST00000309828 RTCBQ9Y3I0 505 aaKnown RBP17.42■□□□□ 0.38
EIF3F-201ENST00000309828 RBM19Q9Y4C8 960 aaKnown RBP17.42■□□□□ 0.38
EIF3F-201ENST00000309828 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
EIF3F-201ENST00000309828 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
EIF3F-201ENST00000309828 GPTP24298 496 aa17.41■□□□□ 0.38
EIF3F-201ENST00000309828 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
EIF3F-201ENST00000309828 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
EIF3F-201ENST00000309828 JARID2Q92833 1246 aaPredicted RBP17.41■□□□□ 0.38
EIF3F-201ENST00000309828 NARFQ9UHQ1 456 aa17.41■□□□□ 0.38
EIF3F-201ENST00000309828 AOX1Q06278 1338 aa17.41■□□□□ 0.38
EIF3F-201ENST00000309828 SALL3Q9BXA9 1300 aa17.41■□□□□ 0.38
EIF3F-201ENST00000309828 ADRA2BP18089 450 aa17.4■□□□□ 0.38
EIF3F-201ENST00000309828 KCNQ4P56696 695 aa17.4■□□□□ 0.38
EIF3F-201ENST00000309828 PLSCR1O15162 318 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 GNPATO15228 680 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 C16orf71Q8IYS4 520 aaPredicted RBP17.39■□□□□ 0.37
EIF3F-201ENST00000309828 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
EIF3F-201ENST00000309828 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
EIF3F-201ENST00000309828 CSF1RP07333 972 aa17.38■□□□□ 0.37
EIF3F-201ENST00000309828 PDE1AP54750 535 aa17.38■□□□□ 0.37
EIF3F-201ENST00000309828 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
EIF3F-201ENST00000309828 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
EIF3F-201ENST00000309828 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
EIF3F-201ENST00000309828 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
EIF3F-201ENST00000309828 PA2G4Q9UQ80 394 aaKnown RBP17.38■□□□□ 0.37
EIF3F-201ENST00000309828 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
EIF3F-201ENST00000309828 PDE8AO60658 829 aa17.37■□□□□ 0.37
EIF3F-201ENST00000309828 MX1P20591 662 aa17.37■□□□□ 0.37
EIF3F-201ENST00000309828 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
EIF3F-201ENST00000309828 LRRC4BQ9NT99 713 aa17.37■□□□□ 0.37
EIF3F-201ENST00000309828 NIP7Q9Y221 180 aaKnown RBP eCLIP17.37■□□□□ 0.37
EIF3F-201ENST00000309828 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
EIF3F-201ENST00000309828 EIF5BO60841 1220 aaKnown RBP17.36■□□□□ 0.37
EIF3F-201ENST00000309828 ZPR1O75312 459 aa17.36■□□□□ 0.37
EIF3F-201ENST00000309828 TRAPPC3LQ5T215 181 aa17.36■□□□□ 0.37
EIF3F-201ENST00000309828 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
EIF3F-201ENST00000309828 OTUD7AQ8TE49 926 aaPredicted RBP17.36■□□□□ 0.37
EIF3F-201ENST00000309828 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
EIF3F-201ENST00000309828 USP42Q9H9J4 1324 aaKnown RBP17.36■□□□□ 0.37
EIF3F-201ENST00000309828 CIAO1O76071 339 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 SASH1O94885 1247 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 CTSWP56202 376 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 IL1RAPL2Q9NP60 686 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
EIF3F-201ENST00000309828 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
EIF3F-201ENST00000309828 NTSR2O95665 410 aa17.34■□□□□ 0.37
EIF3F-201ENST00000309828 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
EIF3F-201ENST00000309828 LAMB2P55268 1798 aa17.34■□□□□ 0.37
EIF3F-201ENST00000309828 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
EIF3F-201ENST00000309828 ARHGEF1Q92888 912 aaKnown RBP17.34■□□□□ 0.37
EIF3F-201ENST00000309828 GPATCH3Q96I76 525 aa17.34■□□□□ 0.37
EIF3F-201ENST00000309828 SSFA2P28290 1259 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 RFC4P35249 363 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 IL15P40933 162 aaPredicted RBP17.33■□□□□ 0.36
EIF3F-201ENST00000309828 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 NYXQ9GZU5 481 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 SIL1Q9H173 461 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 BCL2L12Q9HB09 334 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 C4AP0C0L4 1744 aa17.33■□□□□ 0.36
EIF3F-201ENST00000309828 MYH3P11055 1940 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 EYA2O00167 538 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 CDC45O75419 566 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 APBA3O96018 575 aa17.32■□□□□ 0.36
EIF3F-201ENST00000309828 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
EIF3F-201ENST00000309828 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
EIF3F-201ENST00000309828 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms