RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DNM1Q05193 864 aaKnown RBP15.01□□□□□ -0.01
RETREG3-201ENST00000309428 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 GRM8O00222 908 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 A1BGP04217 495 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 CCDC192P0DO97 292 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 RUFY2Q8WXA3 655 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-201ENST00000309428 APPP05067 770 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 GJB2P29033 226 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
RETREG3-201ENST00000309428 PPP1R9BQ96SB3 815 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 CYP46A1Q9Y6A2 500 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 IFT172Q9UG01 1749 aa15.01□□□□□ -0.01
RETREG3-201ENST00000309428 ATP10DQ9P241 1426 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 GLRX3O76003 335 aaKnown RBP15□□□□□ -0.01
RETREG3-201ENST00000309428 MCM2P49736 904 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 COL9A3Q14050 684 aaPredicted RBP15□□□□□ -0.01
RETREG3-201ENST00000309428 ZDHHC9Q9Y397 364 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
RETREG3-201ENST00000309428 BRPF1P55201 1214 aaPredicted RBP15□□□□□ -0.01
RETREG3-201ENST00000309428 AKAP4Q5JQC9 854 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 BEND3Q5T5X7 828 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 GOLIM4O00461 696 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 LMBR1LQ6UX01 489 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 RBM8AQ9Y5S9 174 aaKnown RBP15□□□□□ -0.01
RETREG3-201ENST00000309428 SNX14Q9Y5W7 946 aa15□□□□□ -0.01
RETREG3-201ENST00000309428 CCDC183Q5T5S1 534 aa14.99□□□□□ -0.01
RETREG3-201ENST00000309428 GIGYF1O75420 1035 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-201ENST00000309428 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
RETREG3-201ENST00000309428 CRB1P82279 1406 aa14.99□□□□□ -0.01
RETREG3-201ENST00000309428 ZNF445P59923 1031 aa14.99□□□□□ -0.01
RETREG3-201ENST00000309428 TFCP2Q12800 502 aa14.99□□□□□ -0.01
RETREG3-201ENST00000309428 EPHA10Q5JZY3 1008 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 ANKRD13DQ6ZTN6 518 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 TAF6LQ9Y6J9 622 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 TNNT1P13805 278 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 HSP90AB4PQ58FF6 505 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 RIMS1Q86UR5 1692 aaKnown RBP14.98□□□□□ -0.01
RETREG3-201ENST00000309428 KIAA0232Q92628 1395 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 A0A087WWV3 80 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 CCDC186Q7Z3E2 898 aa14.98□□□□□ -0.01
RETREG3-201ENST00000309428 BBXQ8WY36 941 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-201ENST00000309428 ZNF790Q6PG37 636 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 BLOC1S2Q6QNY1 142 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 ZFP91Q96JP5 570 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-201ENST00000309428 DBNDD2Q9BQY9 259 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 NUP62CLQ9H1M0 184 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 ERCC4Q92889 916 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-201ENST00000309428 CCDC94Q9BW85 323 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-201ENST00000309428 ARHGEF10O15013 1369 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 PLEKHG1Q9ULL1 1385 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 A0A0D9SFI3 127 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 PTGS1P23219 599 aa14.97□□□□□ -0.01
RETREG3-201ENST00000309428 SYT1P21579 422 aa14.96□□□□□ -0.01
RETREG3-201ENST00000309428 MED14O60244 1454 aa14.96□□□□□ -0.01
RETREG3-201ENST00000309428 VGLL3A8MV65 326 aa14.96□□□□□ -0.01
RETREG3-201ENST00000309428 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
RETREG3-201ENST00000309428 SSH3Q8TE77 659 aa14.96□□□□□ -0.01
RETREG3-201ENST00000309428 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
RETREG3-201ENST00000309428 RICTORQ6R327 1708 aa14.96□□□□□ -0.02
RETREG3-201ENST00000309428 STX6O43752 255 aa14.96□□□□□ -0.02
RETREG3-201ENST00000309428 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.02
RETREG3-201ENST00000309428 SGSM2O43147 1006 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 CCDC82Q8N4S0 544 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 SMC2O95347 1197 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 ATP2B1P20020 1258 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 KRT85P78386 507 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 TTLL7Q6ZT98 887 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 HELBQ8NG08 1087 aaPredicted RBP14.95□□□□□ -0.02
RETREG3-201ENST00000309428 ADGRB2O60241 1585 aa14.95□□□□□ -0.02
RETREG3-201ENST00000309428 HTATSF1O43719 755 aaKnown RBP14.95□□□□□ -0.02
RETREG3-201ENST00000309428 MCM5P33992 734 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 LUZP1Q86V48 1076 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 SPATA32Q96LK8 384 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 TMX1Q9H3N1 280 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
RETREG3-201ENST00000309428 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
RETREG3-201ENST00000309428 MAP3K11Q16584 847 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 AMOTQ4VCS5 1084 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 LARP1Q6PKG0 1096 aaKnown RBP14.94□□□□□ -0.02
RETREG3-201ENST00000309428 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 OVOS2A0A0J9YW53 1432 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 OVOS2Q6IE36 1432 aa14.94□□□□□ -0.02
RETREG3-201ENST00000309428 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
RETREG3-201ENST00000309428 DLC1Q96QB1 1528 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 JAK2O60674 1132 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 BRF1Q92994 677 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 RGS12O14924 1447 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 FAM89AQ96GI7 184 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 NCOA5Q9HCD5 579 aaKnown RBP14.93□□□□□ -0.02
RETREG3-201ENST00000309428 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
RETREG3-201ENST00000309428 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms