RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 PIP4K2AP48426 406 aaPredicted RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 MCM2P49736 904 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 TNPO1Q92973 898 aaKnown RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 ZRSR2Q15696 482 aaKnown RBP10.91□□□□□ -0.66
XCR1-201ENST00000309285 INCENPQ9NQS7 918 aa10.91□□□□□ -0.66
XCR1-201ENST00000309285 JARID2Q92833 1246 aaPredicted RBP10.9□□□□□ -0.66
XCR1-201ENST00000309285 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.66
XCR1-201ENST00000309285 CWF19L2Q2TBE0 894 aaKnown RBP10.9□□□□□ -0.66
XCR1-201ENST00000309285 ANKRD20A12PQ8NF67 263 aa10.9□□□□□ -0.66
XCR1-201ENST00000309285 CCDC8Q9H0W5 538 aaPredicted RBP10.9□□□□□ -0.66
XCR1-201ENST00000309285 OFD1O75665 1012 aa10.9□□□□□ -0.67
XCR1-201ENST00000309285 SSFA2P28290 1259 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 PIP4K2BP78356 416 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 GSPT1P15170 499 aaKnown RBP10.89□□□□□ -0.67
XCR1-201ENST00000309285 KSR2Q6VAB6 950 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 CENPHQ9H3R5 247 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 BABAM1Q9NWV8 329 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 EIF4A1P60842 406 aaKnown RBP10.89□□□□□ -0.67
XCR1-201ENST00000309285 TTLL5Q6EMB2 1281 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 COPS6Q7L5N1 327 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 NBPF7P0C2Y1 421 aaPredicted RBP10.89□□□□□ -0.67
XCR1-201ENST00000309285 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
XCR1-201ENST00000309285 SNX21Q969T3 373 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 FMNL2Q96PY5 1086 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
XCR1-201ENST00000309285 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 USP44Q9H0E7 712 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 BOLA2Q9H3K6 86 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 XAGE3Q8WTP9 111 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
XCR1-201ENST00000309285 TMCO3Q6UWJ1 677 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 PDILTQ8N807 584 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 SDF4Q9BRK5 362 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 NAP1L1P55209 391 aaKnown RBP10.88□□□□□ -0.67
XCR1-201ENST00000309285 ERCC4Q92889 916 aaPredicted RBP10.88□□□□□ -0.67
XCR1-201ENST00000309285 C16orf45Q96MC5 204 aaPredicted RBP10.88□□□□□ -0.67
XCR1-201ENST00000309285 TECPR2O15040 1411 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 PTCH1Q13635 1447 aa10.88□□□□□ -0.67
XCR1-201ENST00000309285 SOS1Q07889 1333 aaPredicted RBP10.88□□□□□ -0.67
XCR1-201ENST00000309285 UBE3BQ7Z3V4 1068 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 UBXN4Q92575 508 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 USP25Q9UHP3 1055 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 A0A087WZG4 1122 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 USP26Q9BXU7 913 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 GRM8O00222 908 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 SMC2O95347 1197 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 SNRPA1P09661 255 aaKnown RBP10.87□□□□□ -0.67
XCR1-201ENST00000309285 ESYT1Q9BSJ8 1104 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 CNNM1Q9NRU3 951 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 ECHDC1Q9NTX5 307 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 CDC42BPGQ6DT37 1551 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
XCR1-201ENST00000309285 CCDC192P0DO97 292 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 ARHGEF25Q86VW2 580 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
XCR1-201ENST00000309285 TBC1D2BQ9UPU7 963 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 PTPRUQ92729 1446 aa10.87□□□□□ -0.67
XCR1-201ENST00000309285 KIF20AO95235 890 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 MCM5P33992 734 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 FILIP1Q7Z7B0 1213 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 LINS1Q8NG48 757 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 CT47A1Q5JQC4 288 aaPredicted RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 MAP2P11137 1827 aaKnown RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 HIP1O00291 1037 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 ZNF830Q96NB3 372 aaPredicted RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 LARP6Q9BRS8 491 aaKnown RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 HOXB7P09629 217 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 ZNF790Q6PG37 636 aa10.86□□□□□ -0.67
XCR1-201ENST00000309285 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 JAKMIP1Q96N16 626 aaKnown RBP10.86□□□□□ -0.67
XCR1-201ENST00000309285 USP31Q70CQ4 1352 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 HOOK1Q9UJC3 728 aaKnown RBP10.85□□□□□ -0.67
XCR1-201ENST00000309285 OVOS2A0A0J9YW53 1432 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 OVOS2Q6IE36 1432 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 KIF6Q6ZMV9 814 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 DDX21Q9NR30 783 aaKnown RBP eCLIP10.85□□□□□ -0.67
XCR1-201ENST00000309285 CYP46A1Q9Y6A2 500 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
XCR1-201ENST00000309285 GOLGA6L7A0A1B0GV03 622 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
XCR1-201ENST00000309285 CEBPZQ03701 1054 aaKnown RBP10.85□□□□□ -0.67
XCR1-201ENST00000309285 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
XCR1-201ENST00000309285 KRT222Q8N1A0 295 aa10.85□□□□□ -0.67
XCR1-201ENST00000309285 USP32Q8NFA0 1604 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
XCR1-201ENST00000309285 GIGYF1O75420 1035 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms