RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 EIF4A2Q14240 407 aaKnown RBP17.68■□□□□ 0.42
LEMD3-201ENST00000308330 CXorf56Q9H5V9 222 aa17.68■□□□□ 0.42
LEMD3-201ENST00000308330 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
LEMD3-201ENST00000308330 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
LEMD3-201ENST00000308330 NEK11Q8NG66 645 aa17.67■□□□□ 0.42
LEMD3-201ENST00000308330 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
LEMD3-201ENST00000308330 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
LEMD3-201ENST00000308330 EXOC6BQ9Y2D4 811 aa17.67■□□□□ 0.42
LEMD3-201ENST00000308330 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
LEMD3-201ENST00000308330 OTUD6BQ8N6M0 293 aa17.67■□□□□ 0.42
LEMD3-201ENST00000308330 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 NUTM1Q86Y26 1132 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 RRP15Q9Y3B9 282 aaKnown RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 ZNHIT6Q9NWK9 470 aaKnown RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 NEMFO60524 1076 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 TERF2Q15554 542 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 ZSCAN29Q8IWY8 852 aaPredicted RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 TRMT1Q9NXH9 659 aaKnown RBP17.66■□□□□ 0.42
LEMD3-201ENST00000308330 LRP2BPQ9P2M1 347 aa17.66■□□□□ 0.42
LEMD3-201ENST00000308330 CCDC171Q6TFL3 1326 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
LEMD3-201ENST00000308330 IFIT5Q13325 482 aaKnown RBP17.65■□□□□ 0.42
LEMD3-201ENST00000308330 SRRTQ9BXP5 876 aaKnown RBP17.65■□□□□ 0.42
LEMD3-201ENST00000308330 KIF4AO95239 1232 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
LEMD3-201ENST00000308330 VPS18Q9P253 973 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 HIP1O00291 1037 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 FLIIQ13045 1269 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 TCHPQ9BT92 498 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
LEMD3-201ENST00000308330 HSPA4P34932 840 aa17.64■□□□□ 0.42
LEMD3-201ENST00000308330 ZKSCAN8Q15776 578 aaPredicted RBP17.64■□□□□ 0.42
LEMD3-201ENST00000308330 SCLT1Q96NL6 688 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 NPATQ14207 1427 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 ZFYVE16Q7Z3T8 1539 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
LEMD3-201ENST00000308330 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
LEMD3-201ENST00000308330 FAM212AQ96EL1 285 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 VPS37CA5D8V6 355 aaPredicted RBP17.64■□□□□ 0.41
LEMD3-201ENST00000308330 FIBPO43427 364 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 IDH1O75874 414 aaKnown RBP17.64■□□□□ 0.41
LEMD3-201ENST00000308330 ATP2B3Q16720 1220 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 CCAR1Q8IX12 1150 aaKnown RBP17.64■□□□□ 0.41
LEMD3-201ENST00000308330 MAP3K19Q56UN5 1328 aa17.64■□□□□ 0.41
LEMD3-201ENST00000308330 MYO1CO00159 1063 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
LEMD3-201ENST00000308330 NACAP1Q9BZK3 213 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 FOSBP53539 338 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 PDILTQ8N807 584 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 SLC24A3Q9HC58 644 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
LEMD3-201ENST00000308330 SMC3Q9UQE7 1217 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 MAP4K4O95819 1239 aaPredicted RBP17.63■□□□□ 0.41
LEMD3-201ENST00000308330 SAFBQ15424 915 aaKnown RBP eCLIP17.63■□□□□ 0.41
LEMD3-201ENST00000308330 MKRN1Q9UHC7 482 aaKnown RBP17.63■□□□□ 0.41
LEMD3-201ENST00000308330 FLT4P35916 1363 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
LEMD3-201ENST00000308330 IFIT1P09914 478 aaKnown RBP17.62■□□□□ 0.41
LEMD3-201ENST00000308330 ERCC3P19447 782 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 WWC2Q6AWC2 1192 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 ERO1AQ96HE7 468 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 GOLGA5Q8TBA6 731 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 EYA1Q99502 592 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 POTEB2H3BUK9 544 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 RAD51AP2Q09MP3 1159 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 TTC36A6NLP5 189 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 KIF3CO14782 793 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 ALDH1L2Q3SY69 923 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 CCDC183Q5T5S1 534 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 MBIPQ9NS73 344 aa17.62■□□□□ 0.41
LEMD3-201ENST00000308330 PSMA5P28066 241 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 INPP5BP32019 993 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 NBPF3Q9H094 633 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 TBC1D32Q96NH3 1257 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 SNW1Q13573 536 aaKnown RBP17.61■□□□□ 0.41
LEMD3-201ENST00000308330 MCM6Q14566 821 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 ARHGAP29Q52LW3 1261 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 TMED8Q6PL24 325 aaPredicted RBP17.61■□□□□ 0.41
LEMD3-201ENST00000308330 IP6K1Q92551 441 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
LEMD3-201ENST00000308330 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 KDM4AO75164 1064 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
LEMD3-201ENST00000308330 NEDD9Q14511 834 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 CCDC73Q6ZRK6 1079 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 TRPM2O94759 1503 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
LEMD3-201ENST00000308330 CEP112Q8N8E3 955 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms