RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
MSRB3-201ENST00000308259 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 NLRP2Q9NX02 1062 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 SYT10Q6XYQ8 523 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
MSRB3-201ENST00000308259 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 CEP83Q9Y592 693 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 TRIM66O15016 1216 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 TMCO3Q6UWJ1 677 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 LMTK3Q96Q04 1460 aa12.32□□□□□ -0.44
MSRB3-201ENST00000308259 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
MSRB3-201ENST00000308259 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 ANKRD20A12PQ8NF67 263 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 TRMT1Q9NXH9 659 aaKnown RBP12.31□□□□□ -0.44
MSRB3-201ENST00000308259 DDX41Q9UJV9 622 aaKnown RBP12.31□□□□□ -0.44
MSRB3-201ENST00000308259 CRB1P82279 1406 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 PPP2R5AQ15172 486 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 CCT4P50991 539 aaKnown RBP12.31□□□□□ -0.44
MSRB3-201ENST00000308259 DNAAF4Q8WXU2 420 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 DLC1Q96QB1 1528 aa12.31□□□□□ -0.44
MSRB3-201ENST00000308259 SLC20A2Q08357 652 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 NCBP1Q09161 790 aaKnown RBP12.3□□□□□ -0.44
MSRB3-201ENST00000308259 H0YHG0 523 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 CCDC172P0C7W6 258 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 CPA1P15085 419 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 SARNPP82979 210 aaKnown RBP12.3□□□□□ -0.44
MSRB3-201ENST00000308259 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
MSRB3-201ENST00000308259 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
MSRB3-201ENST00000308259 ELF2Q15723 593 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
MSRB3-201ENST00000308259 SMTNL1A8MU46 457 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 MYO1CO00159 1063 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 GADD45BO75293 160 aaPredicted RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 CHMLP26374 656 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 SURF6O75683 361 aaKnown RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 TEFQ10587 303 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 PTPN14Q15678 1187 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 FIBPO43427 364 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 LRCH2Q5VUJ6 765 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 KIAA0232Q92628 1395 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 NUTM2BA6NNL0 878 aaPredicted RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 NUTM2EB1AL46 878 aaPredicted RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 RDXP35241 583 aaKnown RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 MAP2K2P36507 400 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 CEP135Q66GS9 1140 aa12.29□□□□□ -0.44
MSRB3-201ENST00000308259 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
MSRB3-201ENST00000308259 PTGS1P23219 599 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 KIF24Q5T7B8 1368 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 ZRSR1Q15695 479 aaKnown RBP12.28□□□□□ -0.44
MSRB3-201ENST00000308259 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 PYCARDQ9ULZ3 195 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 MRVI1Q9Y6F6 885 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 YY1AP1Q9H869 796 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
MSRB3-201ENST00000308259 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.44
MSRB3-201ENST00000308259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.27□□□□□ -0.44
MSRB3-201ENST00000308259 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.44
MSRB3-201ENST00000308259 CCDC30Q5VVM6 783 aa12.27□□□□□ -0.44
MSRB3-201ENST00000308259 USP44Q9H0E7 712 aa12.27□□□□□ -0.44
MSRB3-201ENST00000308259 SPG7Q9UQ90 795 aa12.27□□□□□ -0.44
MSRB3-201ENST00000308259 PAXBP1Q9Y5B6 917 aa12.27□□□□□ -0.44
MSRB3-201ENST00000308259 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
MSRB3-201ENST00000308259 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
MSRB3-201ENST00000308259 UBXN4Q92575 508 aa12.27□□□□□ -0.45
MSRB3-201ENST00000308259 USP6P35125 1406 aa12.27□□□□□ -0.45
MSRB3-201ENST00000308259 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
MSRB3-201ENST00000308259 ATP8B2P98198 1209 aa12.27□□□□□ -0.45
MSRB3-201ENST00000308259 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
MSRB3-201ENST00000308259 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 GOLGA6L19H0YKK7 550 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 KCNQ3O43525 872 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 MCCP23508 829 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 PAIP2Q9BPZ3 127 aaKnown RBP12.26□□□□□ -0.45
MSRB3-201ENST00000308259 NBPF7P0C2Y1 421 aaPredicted RBP12.26□□□□□ -0.45
MSRB3-201ENST00000308259 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
MSRB3-201ENST00000308259 FAM43BQ6ZT52 329 aaPredicted RBP12.26□□□□□ -0.45
MSRB3-201ENST00000308259 RPAINQ86UA6 219 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 NRXN3Q9Y4C0 1643 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 ATP6V1AP38606 617 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 FILIP1Q7Z7B0 1213 aa12.26□□□□□ -0.45
MSRB3-201ENST00000308259 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 GNAI3P08754 354 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 MICALL1Q8N3F8 863 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 OVOS2A0A0J9YW53 1432 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 OVOS2Q6IE36 1432 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 CEP170BQ9Y4F5 1589 aaPredicted RBP12.25□□□□□ -0.45
MSRB3-201ENST00000308259 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 LRRC59Q96AG4 307 aaKnown RBP12.25□□□□□ -0.45
MSRB3-201ENST00000308259 CCDC34Q96HJ3 373 aa12.25□□□□□ -0.45
MSRB3-201ENST00000308259 TOM1L2Q6ZVM7 507 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms