RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZBTB3Q9H5J0 574 aa8.71□□□□□ -1.01
PTCD2-201ENST00000308077 UTYO14607 1347 aa8.71□□□□□ -1.02
PTCD2-201ENST00000308077 PNMA6EA0A0J9YXQ4 647 aa8.71□□□□□ -1.02
PTCD2-201ENST00000308077 NEXNQ0ZGT2 675 aa8.71□□□□□ -1.02
PTCD2-201ENST00000308077 INTS5Q6P9B9 1019 aaKnown RBP8.71□□□□□ -1.02
PTCD2-201ENST00000308077 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
PTCD2-201ENST00000308077 ANKRD36CQ5JPF3 1778 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 GRM8O00222 908 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 PDE4AP27815 886 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 CRKLP46109 303 aaKnown RBP8.7□□□□□ -1.02
PTCD2-201ENST00000308077 ATP8B2P98198 1209 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 NUCB1Q02818 461 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 GCKRQ14397 625 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 DCTPP1Q9H773 170 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 NUP98P52948 1817 aa8.7□□□□□ -1.02
PTCD2-201ENST00000308077 KCNQ4P56696 695 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 SUCLG2Q96I99 432 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 CCDC87Q9NVE4 849 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 C9orf78Q9NZ63 289 aaPredicted RBP8.69□□□□□ -1.02
PTCD2-201ENST00000308077 IL6STP40189 918 aaPredicted RBP8.69□□□□□ -1.02
PTCD2-201ENST00000308077 HTRA3P83110 453 aa8.69□□□□□ -1.02
PTCD2-201ENST00000308077 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
PTCD2-201ENST00000308077 POLA2Q14181 598 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 HLFQ16534 295 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 PPP1R42Q7Z4L9 355 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 CHD1LQ86WJ1 897 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 JARID2Q92833 1246 aaPredicted RBP8.68□□□□□ -1.02
PTCD2-201ENST00000308077 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 CUL9Q8IWT3 2517 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 HMMRO75330 724 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 CASP7P55210 303 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 ANKRD45Q5TZF3 282 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 SSH3Q8TE77 659 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 ISCA1Q9BUE6 129 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
PTCD2-201ENST00000308077 RBM19Q9Y4C8 960 aaKnown RBP8.68□□□□□ -1.02
PTCD2-201ENST00000308077 TCIRG1Q13488 830 aa8.67□□□□□ -1.02
PTCD2-201ENST00000308077 MTX1Q13505 466 aa8.67□□□□□ -1.02
PTCD2-201ENST00000308077 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
PTCD2-201ENST00000308077 FAM196AQ6ZSG2 479 aa8.67□□□□□ -1.02
PTCD2-201ENST00000308077 BCL11BQ9C0K0 894 aaPredicted RBP8.67□□□□□ -1.02
PTCD2-201ENST00000308077 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
PTCD2-201ENST00000308077 COL15A1P39059 1388 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 A0A087WZG4 1122 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 FOXN1O15353 648 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 EPHA10Q5JZY3 1008 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 UBE3BQ7Z3V4 1068 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
PTCD2-201ENST00000308077 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 ARXQ96QS3 562 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 CWC25Q9NXE8 425 aaPredicted RBP8.66□□□□□ -1.02
PTCD2-201ENST00000308077 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 EXOC6BQ9Y2D4 811 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 H7C1W4 665 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 SRGAP3O43295 1099 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 SMARCA5O60264 1052 aaPredicted RBP8.66□□□□□ -1.02
PTCD2-201ENST00000308077 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
PTCD2-201ENST00000308077 CCDC191Q8NCU4 936 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 SGIP1Q9BQI5 828 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
PTCD2-201ENST00000308077 CCNL1Q9UK58 526 aaPredicted RBP8.66□□□□□ -1.02
PTCD2-201ENST00000308077 ERVV-1B6SEH8 477 aa8.65□□□□□ -1.02
PTCD2-201ENST00000308077 APBB1O00213 710 aa8.65□□□□□ -1.02
PTCD2-201ENST00000308077 TRIM37O94972 964 aa8.65□□□□□ -1.02
PTCD2-201ENST00000308077 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
PTCD2-201ENST00000308077 CNKSR2Q8WXI2 1034 aa8.65□□□□□ -1.02
PTCD2-201ENST00000308077 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
PTCD2-201ENST00000308077 CAMTA2O94983 1202 aa8.65□□□□□ -1.03
PTCD2-201ENST00000308077 PLA2G5P39877 138 aa8.65□□□□□ -1.03
PTCD2-201ENST00000308077 SMIM5Q71RC9 77 aa8.65□□□□□ -1.03
PTCD2-201ENST00000308077 HDAC5Q9UQL6 1122 aa8.65□□□□□ -1.03
PTCD2-201ENST00000308077 C4AP0C0L4 1744 aa8.64□□□□□ -1.03
PTCD2-201ENST00000308077 UBN2Q6ZU65 1347 aa8.64□□□□□ -1.03
PTCD2-201ENST00000308077 GPTP24298 496 aa8.64□□□□□ -1.03
PTCD2-201ENST00000308077 RABL6Q3YEC7 729 aaPredicted RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 RC3H1Q5TC82 1133 aaKnown RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
PTCD2-201ENST00000308077 RGPD3A6NKT7 1758 aaPredicted RBP8.64□□□□□ -1.03
PTCD2-201ENST00000308077 RGPD4Q7Z3J3 1758 aa8.64□□□□□ -1.03
PTCD2-201ENST00000308077 FOXO4P98177 505 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 NLRP10Q86W26 655 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 AMIGO3Q86WK7 504 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 OTUD7AQ8TE49 926 aaPredicted RBP8.63□□□□□ -1.03
PTCD2-201ENST00000308077 BACH2Q9BYV9 841 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 PA2G4Q9UQ80 394 aaKnown RBP8.63□□□□□ -1.03
PTCD2-201ENST00000308077 UBR3Q6ZT12 1888 aa8.63□□□□□ -1.03
PTCD2-201ENST00000308077 SURF6O75683 361 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms