RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 TCIRG1Q13488 830 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 MTX1Q13505 466 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 GCKRQ14397 625 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 C9orf78Q9NZ63 289 aaPredicted RBP16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 NARFQ9UHQ1 456 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 LRRFIP2Q9Y608 721 aaKnown RBP16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 NUP98P52948 1817 aa16■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 SSH3Q8TE77 659 aa15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ARXQ96QS3 562 aa15.99■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 POLA2Q14181 598 aa15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 ZNF34Q8IZ26 560 aa15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 PHF14O94880 888 aa15.97■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 USPL1Q5W0Q7 1092 aa15.96■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 SKAP1Q86WV1 359 aa15.96■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 QSER1Q2KHR3 1735 aa15.96■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.15
SHANK2-AS3-201ENST00000307548 PNMA6EA0A0J9YXQ4 647 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 H7C1W4 665 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 RFC4P35249 363 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PNPLA7Q6ZV29 1317 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 RGS3P49796 1198 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 CASP7P55210 303 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 KAZALD1Q96I82 304 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 CWC25Q9NXE8 425 aaPredicted RBP15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 ZNF652Q9Y2D9 606 aa15.95■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 ZPR1O75312 459 aa15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 GPTP24298 496 aa15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PDE4AP27815 886 aa15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 FLAD1Q8NFF5 587 aa15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 SUCLG2Q96I99 432 aa15.94■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 STK32BQ9NY57 414 aa15.93■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 GYS1P13807 737 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 COL24A1Q17RW2 1714 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 SRGAP3O43295 1099 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 RAB11FIP3O75154 756 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 RABL6Q3YEC7 729 aaPredicted RBP15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 TBC1D9BQ66K14 1250 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 LNPKQ9C0E8 428 aa15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 NIP7Q9Y221 180 aaKnown RBP eCLIP15.92■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PCCAP05165 728 aaPredicted RBP15.91■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 PSDA5PKW4 1024 aaPredicted RBP15.9■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 BACH2Q9BYV9 841 aa15.9■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 BICC1Q9H694 974 aaKnown RBP15.9■□□□□ 0.14
SHANK2-AS3-201ENST00000307548 NTSR2O95665 410 aa15.89■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 ZBTB38Q8NAP3 1195 aaPredicted RBP15.89■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 ZBTB47Q9UFB7 747 aaPredicted RBP15.89■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 NFIXQ14938 502 aa15.89■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 CDHR2Q9BYE9 1310 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 TM4SF1P30408 202 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 FAM161AQ3B820 660 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 FAM89AQ96GI7 184 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 PLA2G12BQ9BX93 195 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 FOXO4P98177 505 aa15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SYNE4Q8N205 404 aa15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 TRMT112Q9UI30 125 aaKnown RBP15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 CARMIL3Q8ND23 1372 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 PLEKHM2Q8IWE5 1019 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 KIF1BPQ96EK5 621 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 PDGFDQ9GZP0 370 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 COPRSQ9NQ92 184 aa15.86■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 DDR1Q08345 913 aa15.85■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
SHANK2-AS3-201ENST00000307548 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms