RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 RBM26Q5T8P6 1007 aaKnown RBP11.02□□□□□ -0.64
PTPRE-202ENST00000306042 CREBRFQ8IUR6 639 aa11.02□□□□□ -0.64
PTPRE-202ENST00000306042 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.64
PTPRE-202ENST00000306042 BCS1LQ9Y276 419 aa11.02□□□□□ -0.64
PTPRE-202ENST00000306042 PDE6BP35913 854 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 TPM4P67936 248 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-202ENST00000306042 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 NEK4P51957 841 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 HELBQ8NG08 1087 aaPredicted RBP11.02□□□□□ -0.65
PTPRE-202ENST00000306042 GJA3Q9Y6H8 435 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 GRM1Q13255 1194 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 C20orf194Q5TEA3 1177 aa11.02□□□□□ -0.65
PTPRE-202ENST00000306042 PDE8AO60658 829 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 ALDH1B1P30837 517 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 SOGA3Q5TF21 947 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 FEZ1Q99689 392 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 TULP4Q9NRJ4 1543 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 CRKLP46109 303 aaKnown RBP11.01□□□□□ -0.65
PTPRE-202ENST00000306042 L1TD1Q5T7N2 865 aaKnown RBP11.01□□□□□ -0.65
PTPRE-202ENST00000306042 LARGE2Q8N3Y3 721 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 CCDC47Q96A33 483 aaKnown RBP11.01□□□□□ -0.65
PTPRE-202ENST00000306042 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
PTPRE-202ENST00000306042 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 UFL1O94874 794 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 KRT32Q14532 448 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 U3KPZ7 1027 aaPredicted RBP11□□□□□ -0.65
PTPRE-202ENST00000306042 EIF6P56537 245 aaKnown RBP11□□□□□ -0.65
PTPRE-202ENST00000306042 DPP8Q6V1X1 898 aaPredicted RBP11□□□□□ -0.65
PTPRE-202ENST00000306042 USP16Q9Y5T5 823 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 BLOC1S2Q6QNY1 142 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 BLMP54132 1417 aaPredicted RBP11□□□□□ -0.65
PTPRE-202ENST00000306042 WDR78Q5VTH9 848 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
PTPRE-202ENST00000306042 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
PTPRE-202ENST00000306042 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
PTPRE-202ENST00000306042 VEZTQ9HBM0 779 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 ANKRD1Q15327 319 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 USPL1Q5W0Q7 1092 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 TRIM35Q9UPQ4 493 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 ADAMTS13Q76LX8 1427 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
PTPRE-202ENST00000306042 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
PTPRE-202ENST00000306042 KCNQ3O43525 872 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 ITGA6P23229 1130 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 KCNQ4P56696 695 aa10.99□□□□□ -0.65
PTPRE-202ENST00000306042 RNF41Q9H4P4 317 aaPredicted RBP10.99□□□□□ -0.65
PTPRE-202ENST00000306042 ATP2B1P20020 1258 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 ATP8B2P98198 1209 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 VPS72Q15906 364 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 G2E3Q7L622 706 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 IQCA1Q86XH1 822 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 EVI5LQ96CN4 794 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
PTPRE-202ENST00000306042 ERBB4Q15303 1308 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 CYP7A1P22680 504 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 TPD52L1Q16890 204 aaPredicted RBP10.98□□□□□ -0.65
PTPRE-202ENST00000306042 NAA16Q6N069 864 aaPredicted RBP10.98□□□□□ -0.65
PTPRE-202ENST00000306042 C2CD5Q86YS7 1000 aa10.98□□□□□ -0.65
PTPRE-202ENST00000306042 PA2G4Q9UQ80 394 aaKnown RBP10.98□□□□□ -0.65
PTPRE-202ENST00000306042 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
PTPRE-202ENST00000306042 TCIRG1Q13488 830 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 MCM2P49736 904 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 BICC1Q9H694 974 aaKnown RBP10.97□□□□□ -0.65
PTPRE-202ENST00000306042 ZNF213O14771 459 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 PIGBQ92521 554 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 IPO9Q96P70 1041 aaKnown RBP10.97□□□□□ -0.65
PTPRE-202ENST00000306042 PALLDQ8WX93 1383 aa10.97□□□□□ -0.65
PTPRE-202ENST00000306042 IL6STP40189 918 aaPredicted RBP10.97□□□□□ -0.65
PTPRE-202ENST00000306042 RABEP1Q15276 862 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 CCDC96Q2M329 555 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 ARHGAP27Q6ZUM4 889 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 CNKSR1Q969H4 720 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
PTPRE-202ENST00000306042 PDE4BQ07343 736 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 STK3Q13188 491 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 ZBTB1Q9Y2K1 713 aa10.96□□□□□ -0.65
PTPRE-202ENST00000306042 USP19O94966 1318 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 PES1O00541 588 aaKnown RBP10.96□□□□□ -0.66
PTPRE-202ENST00000306042 CDKL5O76039 1030 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 CRB1P82279 1406 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 PDCP20941 246 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 MPNDQ8N594 471 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 ANKRD44Q8N8A2 993 aa10.96□□□□□ -0.66
PTPRE-202ENST00000306042 LDHBP07195 334 aaKnown RBP10.95□□□□□ -0.66
PTPRE-202ENST00000306042 PICALMQ13492 652 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 BICD2Q8TD16 824 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 HOOK1Q9UJC3 728 aaKnown RBP10.95□□□□□ -0.66
PTPRE-202ENST00000306042 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 SPATA31D1Q6ZQQ2 1576 aa10.95□□□□□ -0.66
PTPRE-202ENST00000306042 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms