RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CCP110O43303 1012 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 ANXA1P04083 346 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 PTH1RQ03431 593 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 AK7Q96M32 723 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 PI4KAP2A4QPH2 592 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 CPLX1O14810 134 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 PI4KAP1Q8N8J0 262 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 TMX1Q9H3N1 280 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 STAP2Q9UGK3 403 aa15.25■□□□□ 0.03
TRIM35-201ENST00000305364 NLRP6P59044 892 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 TRIM34Q9BYJ4 488 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 LRRC2Q9BYS8 371 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 ERCC6LQ2NKX8 1250 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
TRIM35-201ENST00000305364 LSG1Q9H089 658 aaKnown RBP15.24■□□□□ 0.03
TRIM35-201ENST00000305364 TERF2Q15554 542 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 LRRC8AQ8IWT6 810 aa15.24■□□□□ 0.03
TRIM35-201ENST00000305364 AP5Z1O43299 807 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 PHAXQ9H814 394 aaKnown RBP15.23■□□□□ 0.03
TRIM35-201ENST00000305364 ATP10DQ9P241 1426 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 KIAA0232Q92628 1395 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 CFAP100Q494V2 611 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 ISM2Q6H9L7 571 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 TSPYL1Q9H0U9 437 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 PNPLA6Q8IY17 1366 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 KRT32Q14532 448 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 ZBTB9Q96C00 473 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 PA2G4Q9UQ80 394 aaKnown RBP15.23■□□□□ 0.03
TRIM35-201ENST00000305364 AOX1Q06278 1338 aa15.23■□□□□ 0.03
TRIM35-201ENST00000305364 EPB41L2O43491 1005 aaKnown RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 CCT2P78371 535 aaKnown RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 LEKR1Q6ZMV7 388 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 CREBRFQ8IUR6 639 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 ERCC4Q92889 916 aaPredicted RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 CTIFO43310 598 aaKnown RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 SYCP1Q15431 976 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 RPAP1Q9BWH6 1393 aaPredicted RBP15.22■□□□□ 0.03
TRIM35-201ENST00000305364 SKIDA1Q1XH10 827 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 REREQ9P2R6 1566 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
TRIM35-201ENST00000305364 FBXO38Q6PIJ6 1188 aa15.21■□□□□ 0.03
TRIM35-201ENST00000305364 IL25Q9H293 177 aa15.21■□□□□ 0.03
TRIM35-201ENST00000305364 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
TRIM35-201ENST00000305364 TDRD7Q8NHU6 1098 aaKnown RBP15.21■□□□□ 0.03
TRIM35-201ENST00000305364 ZSCAN16Q9H4T2 348 aaPredicted RBP15.21■□□□□ 0.03
TRIM35-201ENST00000305364 HSP90B2PQ58FF3 399 aa15.21■□□□□ 0.02
TRIM35-201ENST00000305364 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.02
TRIM35-201ENST00000305364 FAM227BQ96M60 508 aa15.21■□□□□ 0.02
TRIM35-201ENST00000305364 A0A087WWV3 80 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 KIAA1210Q9ULL0 1709 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 NBPF7P0C2Y1 421 aaPredicted RBP15.2■□□□□ 0.02
TRIM35-201ENST00000305364 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 NEUROD6Q96NK8 337 aa15.2■□□□□ 0.02
TRIM35-201ENST00000305364 JAK2O60674 1132 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 DDX58O95786 925 aaKnown RBP15.19■□□□□ 0.02
TRIM35-201ENST00000305364 LMAN1P49257 510 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 RIC3Q7Z5B4 369 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 CCDC150Q8NCX0 1101 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 TTC41PQ6P2S7 1318 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 CCDC144BQ3MJ40 725 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 CCDC34Q96HJ3 373 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 TTC14Q96N46 770 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 TTLL5Q6EMB2 1281 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 SSH3Q8TE77 659 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
TRIM35-201ENST00000305364 DHX8Q14562 1220 aaKnown RBP15.19■□□□□ 0.02
TRIM35-201ENST00000305364 ZSWIM4Q9H7M6 989 aa15.19■□□□□ 0.02
TRIM35-201ENST00000305364 USP27XA6NNY8 438 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 SLC27A2O14975 620 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 MORC2Q9Y6X9 1032 aaPredicted RBP15.18■□□□□ 0.02
TRIM35-201ENST00000305364 TPM1P09493 284 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 Q6ZUG5 572 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 TXLNBQ8N3L3 684 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 TM6SF1Q9BZW5 370 aa15.18■□□□□ 0.02
TRIM35-201ENST00000305364 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
TRIM35-201ENST00000305364 USHBP1Q8N6Y0 703 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
TRIM35-201ENST00000305364 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 POLR3DP05423 398 aaPredicted RBP15.17■□□□□ 0.02
TRIM35-201ENST00000305364 C10orf67Q8IYJ2 551 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 ST7Q9NRC1 585 aa15.17■□□□□ 0.02
TRIM35-201ENST00000305364 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
TRIM35-201ENST00000305364 RPS6KB1P23443 525 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms