RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 TM4SF1P30408 202 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 PARP10Q53GL7 1025 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 SUSD4Q5VX71 490 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 SLC16A10Q8TF71 515 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 CRBNQ96SW2 442 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 CARMIL3Q8ND23 1372 aa34.27■■■■□ 3.08
HDAC3-201ENST00000305264 FAM177BA6PVY3 158 aa34.26■■■■□ 3.08
HDAC3-201ENST00000305264 DDR1Q08345 913 aa34.25■■■■□ 3.07
HDAC3-201ENST00000305264 ZBTB7AO95365 584 aa34.25■■■■□ 3.07
HDAC3-201ENST00000305264 IBTKQ9P2D0 1353 aaPredicted RBP34.25■■■■□ 3.07
HDAC3-201ENST00000305264 MEIS3Q99687 375 aa34.23■■■■□ 3.07
HDAC3-201ENST00000305264 USP44Q9H0E7 712 aa34.23■■■■□ 3.07
HDAC3-201ENST00000305264 JARID2Q92833 1246 aaPredicted RBP34.23■■■■□ 3.07
HDAC3-201ENST00000305264 NTSR2O95665 410 aa34.22■■■■□ 3.07
HDAC3-201ENST00000305264 MMP10P09238 476 aa34.22■■■■□ 3.07
HDAC3-201ENST00000305264 DDX19BQ9UMR2 479 aa34.22■■■■□ 3.07
HDAC3-201ENST00000305264 GRM8O00222 908 aa34.22■■■■□ 3.07
HDAC3-201ENST00000305264 POLRMTO00411 1230 aaKnown RBP34.22■■■■□ 3.07
HDAC3-201ENST00000305264 RTL5Q5HYW3 569 aaPredicted RBP34.22■■■■□ 3.07
HDAC3-201ENST00000305264 C9orf78Q9NZ63 289 aaPredicted RBP34.22■■■■□ 3.07
HDAC3-201ENST00000305264 NBPF7P0C2Y1 421 aaPredicted RBP34.21■■■■□ 3.07
HDAC3-201ENST00000305264 TRMT112Q9UI30 125 aaKnown RBP34.21■■■■□ 3.07
HDAC3-201ENST00000305264 PPP1R42Q7Z4L9 355 aa34.2■■■■□ 3.07
HDAC3-201ENST00000305264 UTP14AQ9BVJ6 771 aaKnown RBP34.2■■■■□ 3.07
HDAC3-201ENST00000305264 ZBTB7BO15156 539 aaPredicted RBP34.2■■■■□ 3.06
HDAC3-201ENST00000305264 UBE3BQ7Z3V4 1068 aa34.2■■■■□ 3.06
HDAC3-201ENST00000305264 NBPF5PQ86XG9 351 aaPredicted RBP34.2■■■■□ 3.06
HDAC3-201ENST00000305264 FAM89AQ96GI7 184 aa34.2■■■■□ 3.06
HDAC3-201ENST00000305264 MTFR1LQ9H019 292 aa34.2■■■■□ 3.06
HDAC3-201ENST00000305264 NRXN2Q9P2S2 1712 aa34.19■■■■□ 3.06
HDAC3-201ENST00000305264 SYNE4Q8N205 404 aa34.19■■■■□ 3.06
HDAC3-201ENST00000305264 NUTM1Q86Y26 1132 aa34.18■■■■□ 3.06
HDAC3-201ENST00000305264 ZBTB38Q8NAP3 1195 aaPredicted RBP34.18■■■■□ 3.06
HDAC3-201ENST00000305264 UTYO14607 1347 aa34.18■■■■□ 3.06
HDAC3-201ENST00000305264 PCCAP05165 728 aaPredicted RBP34.18■■■■□ 3.06
HDAC3-201ENST00000305264 EXOC6Q8TAG9 804 aa34.18■■■■□ 3.06
HDAC3-201ENST00000305264 H7C1W4 665 aa34.17■■■■□ 3.06
HDAC3-201ENST00000305264 SERPINB2P05120 415 aa34.17■■■■□ 3.06
HDAC3-201ENST00000305264 CASP7P55210 303 aa34.17■■■■□ 3.06
HDAC3-201ENST00000305264 ATF5Q9Y2D1 282 aaPredicted RBP34.17■■■■□ 3.06
HDAC3-201ENST00000305264 DDX60Q8IY21 1712 aaKnown RBP34.16■■■■□ 3.06
HDAC3-201ENST00000305264 SH3TC1Q8TE82 1336 aa34.15■■■■□ 3.06
HDAC3-201ENST00000305264 LAMB2P55268 1798 aa34.15■■■■□ 3.06
HDAC3-201ENST00000305264 NYXQ9GZU5 481 aa34.15■■■■□ 3.06
HDAC3-201ENST00000305264 ABCC12Q96J65 1359 aa34.15■■■■□ 3.06
HDAC3-201ENST00000305264 PARP3Q9Y6F1 533 aa34.14■■■■□ 3.06
HDAC3-201ENST00000305264 NEFLP07196 543 aa34.14■■■■□ 3.06
HDAC3-201ENST00000305264 UBTFL1P0CB47 393 aaPredicted RBP34.14■■■■□ 3.06
HDAC3-201ENST00000305264 CNBD1Q8NA66 436 aa34.14■■■■□ 3.06
HDAC3-201ENST00000305264 ERFEQ4G0M1 354 aa34.13■■■■□ 3.05
HDAC3-201ENST00000305264 PRR5LQ6MZQ0 368 aa34.13■■■■□ 3.05
HDAC3-201ENST00000305264 TPTE2Q6XPS3 522 aa34.13■■■■□ 3.05
HDAC3-201ENST00000305264 CCDC24Q8N4L8 307 aa34.13■■■■□ 3.05
HDAC3-201ENST00000305264 GNAI3P08754 354 aa34.12■■■■□ 3.05
HDAC3-201ENST00000305264 ZBTB40Q9NUA8 1239 aa34.12■■■■□ 3.05
HDAC3-201ENST00000305264 SUCLG2Q96I99 432 aa34.11■■■■□ 3.05
HDAC3-201ENST00000305264 C1orf115Q9H7X2 142 aa34.11■■■■□ 3.05
HDAC3-201ENST00000305264 CDHR2Q9BYE9 1310 aa34.11■■■■□ 3.05
HDAC3-201ENST00000305264 NPHP1O15259 732 aa34.11■■■■□ 3.05
HDAC3-201ENST00000305264 GTF2E1P29083 439 aaPredicted RBP34.11■■■■□ 3.05
HDAC3-201ENST00000305264 TNRC6CQ9HCJ0 1690 aaKnown RBP34.1■■■■□ 3.05
HDAC3-201ENST00000305264 IRS4O14654 1257 aaPredicted RBP34.09■■■■□ 3.05
HDAC3-201ENST00000305264 KAZALD1Q96I82 304 aa34.09■■■■□ 3.05
HDAC3-201ENST00000305264 LRRFIP2Q9Y608 721 aaKnown RBP34.09■■■■□ 3.05
HDAC3-201ENST00000305264 MYH3P11055 1940 aa34.09■■■■□ 3.05
HDAC3-201ENST00000305264 HCLS1P14317 486 aaPredicted RBP34.09■■■■□ 3.05
HDAC3-201ENST00000305264 ANKRD31Q8N7Z5 1873 aa34.07■■■■□ 3.05
HDAC3-201ENST00000305264 SGIP1Q9BQI5 828 aa34.07■■■■□ 3.05
HDAC3-201ENST00000305264 CHMP4BQ9H444 224 aaKnown RBP34.07■■■■□ 3.04
HDAC3-201ENST00000305264 GNAI2P04899 355 aa34.06■■■■□ 3.04
HDAC3-201ENST00000305264 EPHA10Q5JZY3 1008 aa34.06■■■■□ 3.04
HDAC3-201ENST00000305264 POLD1P28340 1107 aa34.05■■■■□ 3.04
HDAC3-201ENST00000305264 PTGER2P43116 358 aa34.05■■■■□ 3.04
HDAC3-201ENST00000305264 ST5P78524 1137 aa34.05■■■■□ 3.04
HDAC3-201ENST00000305264 BICC1Q9H694 974 aaKnown RBP34.04■■■■□ 3.04
HDAC3-201ENST00000305264 SLC10A5Q5PT55 438 aa34.03■■■■□ 3.04
HDAC3-201ENST00000305264 C3orf67Q6ZVT6 689 aa34.03■■■■□ 3.04
HDAC3-201ENST00000305264 PLA2G12BQ9BX93 195 aa34.03■■■■□ 3.04
HDAC3-201ENST00000305264 FOXO4P98177 505 aa34.02■■■■□ 3.04
HDAC3-201ENST00000305264 RIC1Q4ADV7 1423 aa34.02■■■■□ 3.04
HDAC3-201ENST00000305264 PDE8AO60658 829 aa34.01■■■■□ 3.03
HDAC3-201ENST00000305264 ANKRD44Q8N8A2 993 aa34.01■■■■□ 3.03
HDAC3-201ENST00000305264 SPON1Q9HCB6 807 aa34■■■■□ 3.03
HDAC3-201ENST00000305264 C10orf71Q711Q0 1435 aa34■■■■□ 3.03
HDAC3-201ENST00000305264 HDAC5Q9UQL6 1122 aa34■■■■□ 3.03
HDAC3-201ENST00000305264 CTSWP56202 376 aa33.99■■■■□ 3.03
HDAC3-201ENST00000305264 KIF13BQ9NQT8 1826 aa33.97■■■■□ 3.03
HDAC3-201ENST00000305264 HSP90B1P14625 803 aaKnown RBP33.97■■■■□ 3.03
HDAC3-201ENST00000305264 RABL6Q3YEC7 729 aaPredicted RBP33.97■■■■□ 3.03
HDAC3-201ENST00000305264 LMBR1LQ6UX01 489 aa33.96■■■■□ 3.03
HDAC3-201ENST00000305264 CCDC85AQ96PX6 553 aaPredicted RBP33.96■■■■□ 3.03
HDAC3-201ENST00000305264 COL11A2P13942 1736 aaPredicted RBP33.96■■■■□ 3.03
HDAC3-201ENST00000305264 AAMPQ13685 434 aa33.96■■■■□ 3.03
HDAC3-201ENST00000305264 CEP85Q6P2H3 762 aa33.96■■■■□ 3.03
HDAC3-201ENST00000305264 BRIP1Q9BX63 1249 aa33.96■■■■□ 3.03
HDAC3-201ENST00000305264 PCDHB15Q9Y5E8 787 aa33.96■■■■□ 3.03
HDAC3-201ENST00000305264 TTLL11Q8NHH1 800 aa33.95■■■■□ 3.03
HDAC3-201ENST00000305264 NLRP3Q96P20 1036 aa33.95■■■■□ 3.03
HDAC3-201ENST00000305264 SRCAPQ6ZRS2 3230 aa33.95■■■■□ 3.02
HDAC3-201ENST00000305264 CSF1RP07333 972 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms