RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ANKRD13DQ6ZTN6 518 aa34.19■■■■□ 3.06
CDKN2A-201ENST00000304494 IL16Q14005 1332 aa34.19■■■■□ 3.06
CDKN2A-201ENST00000304494 LTBP3Q9NS15 1303 aa34.19■■■■□ 3.06
CDKN2A-201ENST00000304494 C8orf58Q8NAV2 365 aa34.18■■■■□ 3.06
CDKN2A-201ENST00000304494 TAOK3Q9H2K8 898 aa34.18■■■■□ 3.06
CDKN2A-201ENST00000304494 KDM2BQ8NHM5 1336 aa34.18■■■■□ 3.06
CDKN2A-201ENST00000304494 NLRP10Q86W26 655 aa34.17■■■■□ 3.06
CDKN2A-201ENST00000304494 C7orf43Q8WVR3 580 aa34.17■■■■□ 3.06
CDKN2A-201ENST00000304494 RPGRQ92834 1020 aaKnown RBP34.17■■■■□ 3.06
CDKN2A-201ENST00000304494 FER1L6Q2WGJ9 1857 aa34.16■■■■□ 3.06
CDKN2A-201ENST00000304494 PRELPP51888 382 aa34.16■■■■□ 3.06
CDKN2A-201ENST00000304494 CCDC93Q567U6 631 aa34.16■■■■□ 3.06
CDKN2A-201ENST00000304494 TSR2Q969E8 191 aaKnown RBP34.16■■■■□ 3.06
CDKN2A-201ENST00000304494 KIF3CO14782 793 aa34.15■■■■□ 3.06
CDKN2A-201ENST00000304494 CCDC30Q5VVM6 783 aa34.15■■■■□ 3.06
CDKN2A-201ENST00000304494 FAM9BQ8IZU0 186 aa34.15■■■■□ 3.06
CDKN2A-201ENST00000304494 SLC10A5Q5PT55 438 aa34.14■■■■□ 3.06
CDKN2A-201ENST00000304494 NLRP3Q96P20 1036 aa34.14■■■■□ 3.06
CDKN2A-201ENST00000304494 HOXA10P31260 410 aaPredicted RBP34.13■■■■□ 3.05
CDKN2A-201ENST00000304494 GOLGA2Q08379 1002 aa34.12■■■■□ 3.05
CDKN2A-201ENST00000304494 RBM17Q96I25 401 aaKnown RBP34.12■■■■□ 3.05
CDKN2A-201ENST00000304494 TRMT112Q9UI30 125 aaKnown RBP34.12■■■■□ 3.05
CDKN2A-201ENST00000304494 WDR63Q8IWG1 891 aa34.11■■■■□ 3.05
CDKN2A-201ENST00000304494 RTKN2Q8IZC4 609 aa34.1■■■■□ 3.05
CDKN2A-201ENST00000304494 TSPYL6Q8N831 410 aa34.1■■■■□ 3.05
CDKN2A-201ENST00000304494 NMRK2Q9NPI5 230 aa34.1■■■■□ 3.05
CDKN2A-201ENST00000304494 SALL2Q9Y467 1007 aaPredicted RBP34.1■■■■□ 3.05
CDKN2A-201ENST00000304494 TIAM2Q8IVF5 1701 aa34.1■■■■□ 3.05
CDKN2A-201ENST00000304494 SH3TC1Q8TE82 1336 aa34.09■■■■□ 3.05
CDKN2A-201ENST00000304494 CRAMP1Q96RY5 1269 aa34.09■■■■□ 3.05
CDKN2A-201ENST00000304494 PHAXQ9H814 394 aaKnown RBP34.09■■■■□ 3.05
CDKN2A-201ENST00000304494 RIC3Q7Z5B4 369 aa34.08■■■■□ 3.05
CDKN2A-201ENST00000304494 ISCA1Q9BUE6 129 aa34.08■■■■□ 3.05
CDKN2A-201ENST00000304494 CCDC88AQ3V6T2 1871 aa34.07■■■■□ 3.05
CDKN2A-201ENST00000304494 FKBP4Q02790 459 aaKnown RBP eCLIP34.07■■■■□ 3.04
CDKN2A-201ENST00000304494 GLTPD2A6NH11 291 aa34.06■■■■□ 3.04
CDKN2A-201ENST00000304494 TWISTNBQ3B726 338 aaPredicted RBP34.06■■■■□ 3.04
CDKN2A-201ENST00000304494 CC2D2BQ6DHV5 1058 aa34.06■■■■□ 3.04
CDKN2A-201ENST00000304494 C3orf67Q6ZVT6 689 aa34.06■■■■□ 3.04
CDKN2A-201ENST00000304494 DDX58O95786 925 aaKnown RBP34.05■■■■□ 3.04
CDKN2A-201ENST00000304494 STK31Q9BXU1 1019 aa34.05■■■■□ 3.04
CDKN2A-201ENST00000304494 ATP5J2-PTCD1G3V325 749 aa34.04■■■■□ 3.04
CDKN2A-201ENST00000304494 TRIM28Q13263 835 aaKnown RBP34.04■■■■□ 3.04
CDKN2A-201ENST00000304494 FANCIQ9NVI1 1328 aa34.04■■■■□ 3.04
CDKN2A-201ENST00000304494 DICER1Q9UPY3 1922 aaKnown RBP34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 TOMM70O94826 608 aa34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 HCLS1P14317 486 aaPredicted RBP34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 GRIPAP1Q4V328 841 aa34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 DPY19L2Q6NUT2 758 aa34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 OLFM4Q6UX06 510 aa34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 C16orf71Q8IYS4 520 aaPredicted RBP34.03■■■■□ 3.04
CDKN2A-201ENST00000304494 PPEF1O14829 653 aaPredicted RBP34.01■■■■□ 3.03
CDKN2A-201ENST00000304494 SYNE4Q8N205 404 aa34.01■■■■□ 3.03
CDKN2A-201ENST00000304494 RRAGCQ9HB90 399 aa34.01■■■■□ 3.03
CDKN2A-201ENST00000304494 TMX4Q9H1E5 349 aaPredicted RBP34■■■■□ 3.03
CDKN2A-201ENST00000304494 PSMD1Q99460 953 aa33.99■■■■□ 3.03
CDKN2A-201ENST00000304494 FAM89AQ96GI7 184 aa33.98■■■■□ 3.03
CDKN2A-201ENST00000304494 ZNF277Q9NRM2 450 aaPredicted RBP33.98■■■■□ 3.03
CDKN2A-201ENST00000304494 SNED1Q8TER0 1413 aa33.97■■■■□ 3.03
CDKN2A-201ENST00000304494 DDX46Q7L014 1031 aaKnown RBP33.97■■■■□ 3.03
CDKN2A-201ENST00000304494 ZNF428Q96B54 188 aa33.97■■■■□ 3.03
CDKN2A-201ENST00000304494 MYD88Q99836 296 aa33.97■■■■□ 3.03
CDKN2A-201ENST00000304494 ABCC4O15439 1325 aa33.97■■■■□ 3.03
CDKN2A-201ENST00000304494 MYH16Q9H6N6 1097 aa33.96■■■■□ 3.03
CDKN2A-201ENST00000304494 LAMB2P55268 1798 aa33.95■■■■□ 3.03
CDKN2A-201ENST00000304494 BBOX1O75936 387 aa33.95■■■■□ 3.03
CDKN2A-201ENST00000304494 VEGFAP15692 232 aaPredicted RBP33.95■■■■□ 3.03
CDKN2A-201ENST00000304494 RBM46Q8TBY0 533 aaKnown RBP33.95■■■■□ 3.03
CDKN2A-201ENST00000304494 METTL22Q9BUU2 404 aaPredicted RBP33.95■■■■□ 3.03
CDKN2A-201ENST00000304494 IARSP41252 1262 aaKnown RBP33.94■■■■□ 3.02
CDKN2A-201ENST00000304494 KSR2Q6VAB6 950 aa33.94■■■■□ 3.02
CDKN2A-201ENST00000304494 CCDC191Q8NCU4 936 aa33.94■■■■□ 3.02
CDKN2A-201ENST00000304494 ATP6V0A2Q9Y487 856 aa33.94■■■■□ 3.02
CDKN2A-201ENST00000304494 TCERG1O14776 1098 aaKnown RBP33.93■■■■□ 3.02
CDKN2A-201ENST00000304494 SLC4A2P04920 1241 aa33.93■■■■□ 3.02
CDKN2A-201ENST00000304494 HSP90B1P14625 803 aaKnown RBP33.93■■■■□ 3.02
CDKN2A-201ENST00000304494 ZBTB38Q8NAP3 1195 aaPredicted RBP33.93■■■■□ 3.02
CDKN2A-201ENST00000304494 MAP3K2Q9Y2U5 619 aa33.93■■■■□ 3.02
CDKN2A-201ENST00000304494 DDX60Q8IY21 1712 aaKnown RBP33.92■■■■□ 3.02
CDKN2A-201ENST00000304494 IRS4O14654 1257 aaPredicted RBP33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 HSPA6P17066 643 aa33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 EXOSC9Q06265 439 aaKnown RBP33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 GRAPQ13588 217 aa33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 RTL5Q5HYW3 569 aaPredicted RBP33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 GRAPLQ8TC17 118 aaPredicted RBP33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 CWC25Q9NXE8 425 aaPredicted RBP33.91■■■■□ 3.02
CDKN2A-201ENST00000304494 WDR90Q96KV7 1748 aa33.9■■■■□ 3.02
CDKN2A-201ENST00000304494 PI4KAP2A4QPH2 592 aa33.9■■■■□ 3.02
CDKN2A-201ENST00000304494 SF3B3Q15393 1217 aaKnown RBP33.9■■■■□ 3.02
CDKN2A-201ENST00000304494 PI4KAP1Q8N8J0 262 aa33.9■■■■□ 3.02
CDKN2A-201ENST00000304494 VAMP4O75379 141 aa33.89■■■■□ 3.02
CDKN2A-201ENST00000304494 SPINK5Q9NQ38 1064 aaPredicted RBP33.89■■■■□ 3.02
CDKN2A-201ENST00000304494 NEXNQ0ZGT2 675 aa33.88■■■■□ 3.01
CDKN2A-201ENST00000304494 TMC4Q7Z404 712 aa33.88■■■■□ 3.01
CDKN2A-201ENST00000304494 SP8Q8IXZ3 490 aa33.88■■■■□ 3.01
CDKN2A-201ENST00000304494 PCCAP05165 728 aaPredicted RBP33.87■■■■□ 3.01
CDKN2A-201ENST00000304494 FSTL1Q12841 308 aa33.87■■■■□ 3.01
CDKN2A-201ENST00000304494 JDP2Q8WYK2 163 aa33.87■■■■□ 3.01
CDKN2A-201ENST00000304494 DDNO94850 711 aaPredicted RBP33.86■■■■□ 3.01
CDKN2A-201ENST00000304494 G2E3Q7L622 706 aa33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms