RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PRPF40BQ6NWY9 871 aaKnown RBP14.66□□□□□ -0.06
CLCC1-201ENST00000302500 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
CLCC1-201ENST00000302500 RNF123Q5XPI4 1314 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 TCIRG1Q13488 830 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 ARHGAP27Q6ZUM4 889 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 WDR63Q8IWG1 891 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 SYNE4Q8N205 404 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 PLBD2Q8NHP8 589 aa14.65□□□□□ -0.06
CLCC1-201ENST00000302500 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
CLCC1-201ENST00000302500 WDR90Q96KV7 1748 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 KIF3CO14782 793 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 NPR1P16066 1061 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 TRIM28Q13263 835 aaKnown RBP14.64□□□□□ -0.07
CLCC1-201ENST00000302500 PARP10Q53GL7 1025 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 C9orf131Q5VYM1 1079 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
CLCC1-201ENST00000302500 HYPKQ9NX55 129 aa14.64□□□□□ -0.07
CLCC1-201ENST00000302500 OLFM4Q6UX06 510 aa14.63□□□□□ -0.07
CLCC1-201ENST00000302500 NYXQ9GZU5 481 aa14.63□□□□□ -0.07
CLCC1-201ENST00000302500 ZC3H4Q9UPT8 1303 aaKnown RBP14.62□□□□□ -0.07
CLCC1-201ENST00000302500 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
CLCC1-201ENST00000302500 C21orf2O43822 256 aa14.62□□□□□ -0.07
CLCC1-201ENST00000302500 ANKRD13DQ6ZTN6 518 aa14.62□□□□□ -0.07
CLCC1-201ENST00000302500 CNKSR1Q969H4 720 aa14.62□□□□□ -0.07
CLCC1-201ENST00000302500 FAM177BA6PVY3 158 aa14.61□□□□□ -0.07
CLCC1-201ENST00000302500 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
CLCC1-201ENST00000302500 ZNF622Q969S3 477 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■□□□□ 11.2
CLCC1-201ENST00000302500 MYH3P11055 1940 aa14.6□□□□□ -0.07
CLCC1-201ENST00000302500 VAMP4O75379 141 aa14.6□□□□□ -0.07
CLCC1-201ENST00000302500 LMNB1P20700 586 aa14.6□□□□□ -0.07
CLCC1-201ENST00000302500 HSP90AB3PQ58FF7 597 aa14.6□□□□□ -0.07
CLCC1-201ENST00000302500 G2E3Q7L622 706 aa14.6□□□□□ -0.07
CLCC1-201ENST00000302500 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
CLCC1-201ENST00000302500 FAM9BQ8IZU0 186 aa14.59□□□□□ -0.07
CLCC1-201ENST00000302500 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
CLCC1-201ENST00000302500 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
CLCC1-201ENST00000302500 RNF181Q9P0P0 153 aa14.59□□□□□ -0.07
CLCC1-201ENST00000302500 PCNTO95613 3336 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 POTECB2RU33 542 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 IGKV5-2P06315 115 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 PPP1R42Q7Z4L9 355 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 ADAMTSL1Q8N6G6 1762 aa14.58□□□□□ -0.08
CLCC1-201ENST00000302500 CCDC30Q5VVM6 783 aa14.57□□□□□ -0.08
CLCC1-201ENST00000302500 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
CLCC1-201ENST00000302500 NMRK2Q9NPI5 230 aa14.57□□□□□ -0.08
CLCC1-201ENST00000302500 ABCC4O15439 1325 aa14.57□□□□□ -0.08
CLCC1-201ENST00000302500 ATP5J2-PTCD1G3V325 749 aa14.56□□□□□ -0.08
CLCC1-201ENST00000302500 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
CLCC1-201ENST00000302500 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
CLCC1-201ENST00000302500 GPBP1L1Q9HC44 474 aaPredicted RBP14.56□□□□□ -0.08
CLCC1-201ENST00000302500 SH3TC1Q8TE82 1336 aa14.56□□□□□ -0.08
CLCC1-201ENST00000302500 ZNF646O15015 1829 aaPredicted RBP14.55□□□□□ -0.08
CLCC1-201ENST00000302500 HCLS1P14317 486 aaPredicted RBP14.55□□□□□ -0.08
CLCC1-201ENST00000302500 ALDH1B1P30837 517 aa14.55□□□□□ -0.08
CLCC1-201ENST00000302500 SF3B3Q15393 1217 aaKnown RBP14.55□□□□□ -0.08
CLCC1-201ENST00000302500 PSMD1Q99460 953 aa14.55□□□□□ -0.08
CLCC1-201ENST00000302500 TAOK3Q9H2K8 898 aa14.55□□□□□ -0.08
CLCC1-201ENST00000302500 SCN4AP35499 1836 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCC1-201ENST00000302500 CCDC93Q567U6 631 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
CLCC1-201ENST00000302500 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
CLCC1-201ENST00000302500 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
CLCC1-201ENST00000302500 PI4KAP2A4QPH2 592 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 GLTPD2A6NH11 291 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
CLCC1-201ENST00000302500 CASP7P55210 303 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 KSR2Q6VAB6 950 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 PI4KAP1Q8N8J0 262 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 ZBTB38Q8NAP3 1195 aaPredicted RBP14.53□□□□□ -0.08
CLCC1-201ENST00000302500 CCDC191Q8NCU4 936 aa14.53□□□□□ -0.08
CLCC1-201ENST00000302500 ZNF526Q8TF50 670 aaPredicted RBP14.53□□□□□ -0.08
CLCC1-201ENST00000302500 RTFDC1Q9BY42 306 aaPredicted RBP14.53□□□□□ -0.08
CLCC1-201ENST00000302500 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
CLCC1-201ENST00000302500 ZNF428Q96B54 188 aa14.52□□□□□ -0.08
CLCC1-201ENST00000302500 NLRP3Q96P20 1036 aa14.52□□□□□ -0.08
CLCC1-201ENST00000302500 MAP3K2Q9Y2U5 619 aa14.52□□□□□ -0.08
CLCC1-201ENST00000302500 ATP6V0A2Q9Y487 856 aa14.52□□□□□ -0.08
CLCC1-201ENST00000302500 FZD9O00144 591 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 NPHP1O15259 732 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 PCCAP05165 728 aaPredicted RBP14.51□□□□□ -0.09
CLCC1-201ENST00000302500 GTF2E1P29083 439 aaPredicted RBP14.51□□□□□ -0.09
CLCC1-201ENST00000302500 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 FLIIQ13045 1269 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 CC2D2BQ6DHV5 1058 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 MYD88Q99836 296 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 CDHR2Q9BYE9 1310 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 PSME4Q14997 1843 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 SPEF2Q9C093 1822 aa14.51□□□□□ -0.09
CLCC1-201ENST00000302500 NEURL1BA8MQ27 555 aa14.5□□□□□ -0.09
CLCC1-201ENST00000302500 PPEF1O14829 653 aaPredicted RBP14.5□□□□□ -0.09
CLCC1-201ENST00000302500 RIC3Q7Z5B4 369 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms