RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 GNPATO15228 680 aa16.08■□□□□ 0.16
CCDC7-202ENST00000302316 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
CCDC7-202ENST00000302316 PCCAP05165 728 aaPredicted RBP16.08■□□□□ 0.16
CCDC7-202ENST00000302316 RABL6Q3YEC7 729 aaPredicted RBP16.08■□□□□ 0.16
CCDC7-202ENST00000302316 HSP90AB4PQ58FF6 505 aa16.08■□□□□ 0.16
CCDC7-202ENST00000302316 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
CCDC7-202ENST00000302316 C4BP0C0L5 1744 aa16.08■□□□□ 0.16
CCDC7-202ENST00000302316 OS9Q13438 667 aaPredicted RBP16.07■□□□□ 0.16
CCDC7-202ENST00000302316 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
CCDC7-202ENST00000302316 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
CCDC7-202ENST00000302316 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
CCDC7-202ENST00000302316 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
CCDC7-202ENST00000302316 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
CCDC7-202ENST00000302316 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 FOXO4P98177 505 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 LMBR1LQ6UX01 489 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
CCDC7-202ENST00000302316 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
CCDC7-202ENST00000302316 RTCBQ9Y3I0 505 aaKnown RBP16.06■□□□□ 0.16
CCDC7-202ENST00000302316 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
CCDC7-202ENST00000302316 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
CCDC7-202ENST00000302316 RHPN1Q8TCX5 695 aa16.05■□□□□ 0.16
CCDC7-202ENST00000302316 AK7Q96M32 723 aa16.05■□□□□ 0.16
CCDC7-202ENST00000302316 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
CCDC7-202ENST00000302316 SLC27A3Q5K4L6 730 aa16.04■□□□□ 0.16
CCDC7-202ENST00000302316 IL1RAPL2Q9NP60 686 aa16.04■□□□□ 0.16
CCDC7-202ENST00000302316 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
CCDC7-202ENST00000302316 CDHR2Q9BYE9 1310 aa16.04■□□□□ 0.16
CCDC7-202ENST00000302316 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
CCDC7-202ENST00000302316 ERC1Q8IUD2 1116 aa16.04■□□□□ 0.16
CCDC7-202ENST00000302316 G3BP1Q13283 466 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC7-202ENST00000302316 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 SIL1Q9H173 461 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 NIP7Q9Y221 180 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC7-202ENST00000302316 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
CCDC7-202ENST00000302316 PARP10Q53GL7 1025 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 BMP2KLQ5H9B9 411 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 PLA2G12BQ9BX93 195 aa16.03■□□□□ 0.16
CCDC7-202ENST00000302316 COPRSQ9NQ92 184 aa16.02■□□□□ 0.16
CCDC7-202ENST00000302316 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 PHF14O94880 888 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
CCDC7-202ENST00000302316 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 IRS4O14654 1257 aaPredicted RBP16.01■□□□□ 0.15
CCDC7-202ENST00000302316 RGL2O15211 777 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 ZPR1O75312 459 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
CCDC7-202ENST00000302316 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
CCDC7-202ENST00000302316 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 APBA3O96018 575 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 MX1P20591 662 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 PDE1AP54750 535 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 TTC22Q5TAA0 569 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
CCDC7-202ENST00000302316 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
CCDC7-202ENST00000302316 C4AP0C0L4 1744 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
CCDC7-202ENST00000302316 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
CCDC7-202ENST00000302316 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
CCDC7-202ENST00000302316 NUTM1Q86Y26 1132 aa15.99■□□□□ 0.15
CCDC7-202ENST00000302316 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
CCDC7-202ENST00000302316 OSBPL3Q9H4L5 887 aa15.99■□□□□ 0.15
CCDC7-202ENST00000302316 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
CCDC7-202ENST00000302316 TNS1Q9HBL0 1735 aaKnown RBP15.99■□□□□ 0.15
CCDC7-202ENST00000302316 PLSCR1O15162 318 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 SASH1O94885 1247 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 NTSR2O95665 410 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 RFC4P35249 363 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 CTSWP56202 376 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 CCDC85AQ96PX6 553 aaPredicted RBP15.98■□□□□ 0.15
CCDC7-202ENST00000302316 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 PDE8AO60658 829 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 CSF1RP07333 972 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 ADRA2BP18089 450 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 HMGB2P26583 209 aaKnown RBP15.98■□□□□ 0.15
CCDC7-202ENST00000302316 CCDC57Q2TAC2 916 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 TSHZ3Q63HK5 1081 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 PROM2Q8N271 834 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 MYH3P11055 1940 aa15.98■□□□□ 0.15
CCDC7-202ENST00000302316 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
CCDC7-202ENST00000302316 TBC1D9BQ66K14 1250 aa15.97■□□□□ 0.15
CCDC7-202ENST00000302316 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
CCDC7-202ENST00000302316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
CCDC7-202ENST00000302316 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
CCDC7-202ENST00000302316 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
CCDC7-202ENST00000302316 TAF7LQ5H9L4 462 aa15.96■□□□□ 0.15
CCDC7-202ENST00000302316 AACSQ86V21 672 aa15.96■□□□□ 0.15
CCDC7-202ENST00000302316 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
CCDC7-202ENST00000302316 ZNF594Q96JF6 807 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms