RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 UQCRHP07919 91 aa29.2■■■□□ 2.27
SPTSSA-201ENST00000298130 EVI5LQ96CN4 794 aa29.2■■■□□ 2.27
SPTSSA-201ENST00000298130 ADCY5O95622 1261 aa29.2■■■□□ 2.26
SPTSSA-201ENST00000298130 RIC3Q7Z5B4 369 aa29.2■■■□□ 2.26
SPTSSA-201ENST00000298130 FSD1Q9BTV5 496 aa29.2■■■□□ 2.26
SPTSSA-201ENST00000298130 EPHA10Q5JZY3 1008 aa29.19■■■□□ 2.26
SPTSSA-201ENST00000298130 VPS53Q5VIR6 699 aa29.19■■■□□ 2.26
SPTSSA-201ENST00000298130 ALDH1L1O75891 902 aa29.19■■■□□ 2.26
SPTSSA-201ENST00000298130 TMEM87AQ8NBN3 555 aa29.19■■■□□ 2.26
SPTSSA-201ENST00000298130 IGKV5-2P06315 115 aa29.18■■■□□ 2.26
SPTSSA-201ENST00000298130 NFAT5O94916 1531 aa29.18■■■□□ 2.26
SPTSSA-201ENST00000298130 ZKSCAN1P17029 563 aaPredicted RBP29.18■■■□□ 2.26
SPTSSA-201ENST00000298130 ARHGEF25Q86VW2 580 aa29.18■■■□□ 2.26
SPTSSA-201ENST00000298130 ZNF589Q86UQ0 364 aaPredicted RBP29.18■■■□□ 2.26
SPTSSA-201ENST00000298130 AMOTQ4VCS5 1084 aa29.17■■■□□ 2.26
SPTSSA-201ENST00000298130 CDC37L1Q7L3B6 337 aa29.17■■■□□ 2.26
SPTSSA-201ENST00000298130 LINS1Q8NG48 757 aa29.17■■■□□ 2.26
SPTSSA-201ENST00000298130 SLC27A2O14975 620 aa29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 PDIA6Q15084 440 aa29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 VSIG10Q8N0Z9 540 aa29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 N4BP2Q86UW6 1770 aaPredicted RBP29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 CAMK4Q16566 473 aa29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 DNTTIP2Q5QJE6 756 aaKnown RBP29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 LARP1BQ659C4 914 aaKnown RBP29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 MED1Q15648 1581 aaPredicted RBP29.16■■■□□ 2.26
SPTSSA-201ENST00000298130 ERC1Q8IUD2 1116 aa29.15■■■□□ 2.26
SPTSSA-201ENST00000298130 MYD88Q99836 296 aa29.14■■■□□ 2.26
SPTSSA-201ENST00000298130 AP5Z1O43299 807 aa29.14■■■□□ 2.26
SPTSSA-201ENST00000298130 ANKLE2Q86XL3 938 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 TFIP11Q9UBB9 837 aaKnown RBP29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 NFATC2IPQ8NCF5 419 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 XAGE3Q8WTP9 111 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 MAP4K1Q92918 833 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 KDM3BQ7LBC6 1761 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 COPS6Q7L5N1 327 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 ATP6V1DQ9Y5K8 247 aa29.13■■■□□ 2.25
SPTSSA-201ENST00000298130 DDX21Q9NR30 783 aaKnown RBP eCLIP29.12■■■□□ 2.25
SPTSSA-201ENST00000298130 KIAA2012Q0VF49 1180 aa29.12■■■□□ 2.25
SPTSSA-201ENST00000298130 TTC6Q86TZ1 520 aa29.11■■■□□ 2.25
SPTSSA-201ENST00000298130 TSC1Q92574 1164 aa29.11■■■□□ 2.25
SPTSSA-201ENST00000298130 CCDC129Q6ZRS4 1044 aa29.11■■■□□ 2.25
SPTSSA-201ENST00000298130 CHMP4AQ9BY43 222 aa29.11■■■□□ 2.25
SPTSSA-201ENST00000298130 SPC24Q8NBT2 197 aa29.1■■■□□ 2.25
SPTSSA-201ENST00000298130 DDX17Q92841 729 aaKnown RBP29.1■■■□□ 2.25
SPTSSA-201ENST00000298130 DDX58O95786 925 aaKnown RBP29.1■■■□□ 2.25
SPTSSA-201ENST00000298130 ZSCAN31Q96LW9 406 aaPredicted RBP29.1■■■□□ 2.25
SPTSSA-201ENST00000298130 MCM5P33992 734 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 SH2B1Q9NRF2 756 aaPredicted RBP29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 NLRP2Q9NX02 1062 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 ATP5J2-PTCD1G3V325 749 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 PTCD1O75127 700 aaKnown RBP29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 BLOC1S2Q6QNY1 142 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 SEC62Q99442 399 aaKnown RBP29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 TM6SF1Q9BZW5 370 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 FER1L4A9Z1Z3 1794 aa29.09■■■□□ 2.25
SPTSSA-201ENST00000298130 LIG1P18858 919 aa29.08■■■□□ 2.25
SPTSSA-201ENST00000298130 FAM184AQ8NB25 1140 aa29.08■■■□□ 2.25
SPTSSA-201ENST00000298130 SLFNL1Q499Z3 407 aa29.08■■■□□ 2.25
SPTSSA-201ENST00000298130 ZNF790Q6PG37 636 aa29.08■■■□□ 2.25
SPTSSA-201ENST00000298130 NEURL1BA8MQ27 555 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 PPFIA3O75145 1194 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 LRRC2Q9BYS8 371 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 USP16Q9Y5T5 823 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 CSPP1Q1MSJ5 1256 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 LARP1Q6PKG0 1096 aaKnown RBP29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 CKAP2LQ8IYA6 745 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 KCNB2Q92953 911 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 DNAJC2Q99543 621 aaKnown RBP29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 KDM4AO75164 1064 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 FUCA2Q9BTY2 467 aa29.07■■■□□ 2.24
SPTSSA-201ENST00000298130 FOSBP53539 338 aa29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 DDX11Q96FC9 970 aa29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 ZNF496Q96IT1 587 aaPredicted RBP29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 HEG1Q9ULI3 1381 aa29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 FAM177BA6PVY3 158 aa29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 TOB2Q14106 344 aaPredicted RBP29.06■■■□□ 2.24
SPTSSA-201ENST00000298130 JAK2O60674 1132 aa29.05■■■□□ 2.24
SPTSSA-201ENST00000298130 GCKRQ14397 625 aa29.05■■■□□ 2.24
SPTSSA-201ENST00000298130 TFCP2Q12800 502 aa29.05■■■□□ 2.24
SPTSSA-201ENST00000298130 UVSSAQ2YD98 709 aa29.05■■■□□ 2.24
SPTSSA-201ENST00000298130 NEXNQ0ZGT2 675 aa29.04■■■□□ 2.24
SPTSSA-201ENST00000298130 UBE3BQ7Z3V4 1068 aa29.04■■■□□ 2.24
SPTSSA-201ENST00000298130 DBNLQ9UJU6 430 aaKnown RBP29.04■■■□□ 2.24
SPTSSA-201ENST00000298130 GLIPR1L2Q4G1C9 344 aa29.04■■■□□ 2.24
SPTSSA-201ENST00000298130 KRT28Q7Z3Y7 464 aa29.03■■■□□ 2.24
SPTSSA-201ENST00000298130 RPS6KB1P23443 525 aa29.03■■■□□ 2.24
SPTSSA-201ENST00000298130 PDCL3Q9H2J4 239 aa29.03■■■□□ 2.24
SPTSSA-201ENST00000298130 COL15A1P39059 1388 aa29.02■■■□□ 2.24
SPTSSA-201ENST00000298130 LETM1O95202 739 aaPredicted RBP29.02■■■□□ 2.24
SPTSSA-201ENST00000298130 PSMA5P28066 241 aa29.02■■■□□ 2.24
SPTSSA-201ENST00000298130 CRYBG1Q9Y4K1 1723 aa29.02■■■□□ 2.24
SPTSSA-201ENST00000298130 NPHP4O75161 1426 aaPredicted RBP29.02■■■□□ 2.24
SPTSSA-201ENST00000298130 NOLC1Q14978 699 aaKnown RBP eCLIP29.01■■■□□ 2.24
SPTSSA-201ENST00000298130 DDX46Q7L014 1031 aaKnown RBP29.01■■■□□ 2.24
SPTSSA-201ENST00000298130 CABLES1Q8TDN4 633 aa29.01■■■□□ 2.24
SPTSSA-201ENST00000298130 KRT85P78386 507 aa29.01■■■□□ 2.23
SPTSSA-201ENST00000298130 SASS6Q6UVJ0 657 aa29.01■■■□□ 2.23
SPTSSA-201ENST00000298130 RAPGEF4Q8WZA2 1011 aa29.01■■■□□ 2.23
SPTSSA-201ENST00000298130 HDAC5Q9UQL6 1122 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms