RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 FAM227BQ96M60 508 aa19.49■□□□□ 0.71
SBSPON-201ENST00000297354 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
SBSPON-201ENST00000297354 PUF60Q9UHX1 559 aaKnown RBP19.49■□□□□ 0.71
SBSPON-201ENST00000297354 KDM5AP29375 1690 aaKnown RBP19.49■□□□□ 0.71
SBSPON-201ENST00000297354 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
SBSPON-201ENST00000297354 RGS12O14924 1447 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 ST5P78524 1137 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 CHST3Q7LGC8 479 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 DEF6Q9H4E7 631 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 ARFGAP3Q9NP61 516 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 NDUFB9Q9Y6M9 179 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 PTPRCP08575 1304 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
SBSPON-201ENST00000297354 SYNE3Q6ZMZ3 975 aa19.48■□□□□ 0.71
SBSPON-201ENST00000297354 NEMFO60524 1076 aa19.47■□□□□ 0.71
SBSPON-201ENST00000297354 GLRX3O76003 335 aaKnown RBP19.47■□□□□ 0.71
SBSPON-201ENST00000297354 PNMA6AP0CW24 399 aaPredicted RBP19.47■□□□□ 0.71
SBSPON-201ENST00000297354 LRRN4CLQ8ND94 238 aa19.47■□□□□ 0.71
SBSPON-201ENST00000297354 VIRMAQ69YN4 1812 aaKnown RBP19.47■□□□□ 0.71
SBSPON-201ENST00000297354 HYPKQ9NX55 129 aa19.47■□□□□ 0.71
SBSPON-201ENST00000297354 KIF2AO00139 706 aaPredicted RBP19.47■□□□□ 0.71
SBSPON-201ENST00000297354 E2F4Q16254 413 aa19.46■□□□□ 0.71
SBSPON-201ENST00000297354 CPLX1O14810 134 aa19.46■□□□□ 0.71
SBSPON-201ENST00000297354 SMC1AQ14683 1233 aaKnown RBP19.46■□□□□ 0.71
SBSPON-201ENST00000297354 PHAXQ9H814 394 aaKnown RBP19.46■□□□□ 0.71
SBSPON-201ENST00000297354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.46■□□□□ 0.71
SBSPON-201ENST00000297354 CASQ1P31415 396 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 CREB3L3Q68CJ9 461 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 RPAP1Q9BWH6 1393 aaPredicted RBP19.45■□□□□ 0.7
SBSPON-201ENST00000297354 IDI1Q13907 227 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 AXDND1Q5T1B0 1012 aaPredicted RBP19.45■□□□□ 0.7
SBSPON-201ENST00000297354 OTUD7BQ6GQQ9 843 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 XPO4Q9C0E2 1151 aaKnown RBP19.45■□□□□ 0.7
SBSPON-201ENST00000297354 NSD2O96028 1365 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 PPARDQ03181 441 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 SMARCE1Q969G3 411 aa19.45■□□□□ 0.7
SBSPON-201ENST00000297354 CCDC12Q8WUD4 166 aaPredicted RBP19.44■□□□□ 0.7
SBSPON-201ENST00000297354 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
SBSPON-201ENST00000297354 GSDMDP57764 484 aa19.44■□□□□ 0.7
SBSPON-201ENST00000297354 RHOXF2BP0C7M4 288 aa19.43■□□□□ 0.7
SBSPON-201ENST00000297354 TOP1P11387 765 aaKnown RBP19.43■□□□□ 0.7
SBSPON-201ENST00000297354 NEUROD6Q96NK8 337 aa19.43■□□□□ 0.7
SBSPON-201ENST00000297354 RHOXF2Q9BQY4 288 aa19.43■□□□□ 0.7
SBSPON-201ENST00000297354 H0YHG0 523 aa19.43■□□□□ 0.7
SBSPON-201ENST00000297354 NMIQ13287 307 aaPredicted RBP19.43■□□□□ 0.7
SBSPON-201ENST00000297354 EDC3Q96F86 508 aaKnown RBP19.43■□□□□ 0.7
SBSPON-201ENST00000297354 IL13P35225 146 aa19.42■□□□□ 0.7
SBSPON-201ENST00000297354 VPS53Q5VIR6 699 aa19.42■□□□□ 0.7
SBSPON-201ENST00000297354 FEZ2Q9UHY8 353 aaPredicted RBP19.42■□□□□ 0.7
SBSPON-201ENST00000297354 ANKRD1Q15327 319 aa19.42■□□□□ 0.7
SBSPON-201ENST00000297354 LZTFL1Q9NQ48 299 aa19.42■□□□□ 0.7
SBSPON-201ENST00000297354 NCOA5Q9HCD5 579 aaKnown RBP19.42■□□□□ 0.7
SBSPON-201ENST00000297354 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 MARCKSP29966 332 aaPredicted RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 SART3Q15020 963 aaKnown RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 JAKMIP3Q5VZ66 844 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 NGDNQ8NEJ9 315 aaKnown RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 GDAP1L1Q96MZ0 367 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 MYO1CO00159 1063 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 UBASH3AP57075 661 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 USHBP1Q8N6Y0 703 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 ZNF396Q96N95 335 aaPredicted RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 ECHDC1Q9NTX5 307 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 SLC3A2P08195 630 aaKnown RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 NBPF7P0C2Y1 421 aaPredicted RBP19.41■□□□□ 0.7
SBSPON-201ENST00000297354 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
SBSPON-201ENST00000297354 RIMS2Q9UQ26 1411 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 TDRD7Q8NHU6 1098 aaKnown RBP19.4■□□□□ 0.7
SBSPON-201ENST00000297354 Q6ZUG5 572 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 PPP1R13BQ96KQ4 1090 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 LSG1Q9H089 658 aaKnown RBP19.4■□□□□ 0.7
SBSPON-201ENST00000297354 PLXNC1O60486 1568 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 ATP10AO60312 1499 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 AKAP17AQ02040 695 aaKnown RBP19.4■□□□□ 0.7
SBSPON-201ENST00000297354 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 MICALL1Q8N3F8 863 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 TMEM87AQ8NBN3 555 aa19.4■□□□□ 0.7
SBSPON-201ENST00000297354 CFAP74Q9C0B2 1584 aa19.39■□□□□ 0.7
SBSPON-201ENST00000297354 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.7
SBSPON-201ENST00000297354 TTC31Q49AM3 519 aaPredicted RBP19.39■□□□□ 0.69
SBSPON-201ENST00000297354 HINFPQ9BQA5 517 aa19.39■□□□□ 0.69
SBSPON-201ENST00000297354 FUCA2Q9BTY2 467 aa19.39■□□□□ 0.69
SBSPON-201ENST00000297354 CCDC129Q6ZRS4 1044 aa19.39■□□□□ 0.69
SBSPON-201ENST00000297354 PGBD1Q96JS3 809 aa19.39■□□□□ 0.69
SBSPON-201ENST00000297354 SOS1Q07889 1333 aaPredicted RBP19.39■□□□□ 0.69
SBSPON-201ENST00000297354 KLHL10Q6JEL2 608 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 MNAT1P51948 309 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 DESI2Q9BSY9 194 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 DUOX2Q9NRD8 1548 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 WWC2Q6AWC2 1192 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 PLA2G4DQ86XP0 818 aa19.38■□□□□ 0.69
SBSPON-201ENST00000297354 LOC102724159A0A0B4J2E5 919 aa19.37■□□□□ 0.69
SBSPON-201ENST00000297354 DHX8Q14562 1220 aaKnown RBP19.37■□□□□ 0.69
SBSPON-201ENST00000297354 PWP2Q15269 919 aaKnown RBP19.37■□□□□ 0.69
SBSPON-201ENST00000297354 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms