RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 NAA30Q147X3 362 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 SDF4Q9BRK5 362 aa15.77■□□□□ 0.12
TNFRSF21-201ENST00000296861 SETD1BQ9UPS6 1966 aaKnown RBP15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 BIN1O00499 593 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 TYRO3Q06418 890 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 SLFNL1Q499Z3 407 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 LSG1Q9H089 658 aaKnown RBP15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 MTMR6Q9Y217 621 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 TAF6LQ9Y6J9 622 aa15.77■□□□□ 0.11
TNFRSF21-201ENST00000296861 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 ADGRB2O60241 1585 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 ME1P48163 572 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 BRF1Q92994 677 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 SEC62Q99442 399 aaKnown RBP15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 MYD88Q99836 296 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 LETM1O95202 739 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 SSH3Q8TE77 659 aa15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
TNFRSF21-201ENST00000296861 MYO3AQ8NEV4 1616 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 TNNT1P13805 278 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 PSMA5P28066 241 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 FAM177A1Q8N128 213 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 PI4K2BQ8TCG2 481 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 BICC1Q9H694 974 aaKnown RBP15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 CLIP2Q9UDT6 1046 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 KIAA0232Q92628 1395 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 A0A0D9SFI3 127 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 HYPKQ9NX55 129 aa15.75■□□□□ 0.11
TNFRSF21-201ENST00000296861 FLT4P35916 1363 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 HSP90AB3PQ58FF7 597 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 EAF2Q96CJ1 260 aaPredicted RBP15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 HAND2P61296 217 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 HSP90AA4PQ58FG1 418 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 MYRIPQ8NFW9 859 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 SNRKQ9NRH2 765 aa15.74■□□□□ 0.11
TNFRSF21-201ENST00000296861 GNL2Q13823 731 aaKnown RBP15.73■□□□□ 0.11
TNFRSF21-201ENST00000296861 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
TNFRSF21-201ENST00000296861 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
TNFRSF21-201ENST00000296861 CCDC94Q9BW85 323 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF21-201ENST00000296861 NCOA5Q9HCD5 579 aaKnown RBP15.73■□□□□ 0.11
TNFRSF21-201ENST00000296861 CCDC171Q6TFL3 1326 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 SMC2O95347 1197 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 PDCP20941 246 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 OTUD7BQ6GQQ9 843 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 CCDC73Q6ZRK6 1079 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 AP5Z1O43299 807 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 DDX58O95786 925 aaKnown RBP15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 WASHC4Q2M389 1173 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 SUCLG2Q96I99 432 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 ZSCAN31Q96LW9 406 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 DBF4Q9UBU7 674 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 MAP2P11137 1827 aaKnown RBP15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 RGS12O14924 1447 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 NR1I2O75469 434 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 POLR3DP05423 398 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 ARID5BQ14865 1188 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 CCDC112Q8NEF3 446 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 FAM200AQ8TCP9 573 aa15.72■□□□□ 0.11
TNFRSF21-201ENST00000296861 PLEKHO1Q53GL0 409 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 CBX8Q9HC52 389 aa15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 AATKQ6ZMQ8 1374 aa15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 USP16Q9Y5T5 823 aa15.71■□□□□ 0.11
TNFRSF21-201ENST00000296861 SLC27A2O14975 620 aa15.71■□□□□ 0.1
TNFRSF21-201ENST00000296861 KINO60870 393 aaKnown RBP15.71■□□□□ 0.1
TNFRSF21-201ENST00000296861 ATP2B1P20020 1258 aa15.71■□□□□ 0.1
TNFRSF21-201ENST00000296861 CREBRFQ8IUR6 639 aa15.71■□□□□ 0.1
TNFRSF21-201ENST00000296861 CDK12Q9NYV4 1490 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 UVSSAQ2YD98 709 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 Q6ZUG5 572 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 HOMER1Q86YM7 354 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 SH2B1Q9NRF2 756 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 ERICH4A6NGS2 130 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 EIF4A1P60842 406 aaKnown RBP15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 PTPN21Q16825 1174 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 BEND3Q5T5X7 828 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 AGLP35573 1532 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 KIF24Q5T7B8 1368 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 MAP3K5Q99683 1374 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 COPS6Q7L5N1 327 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.7■□□□□ 0.1
TNFRSF21-201ENST00000296861 GOLIM4O00461 696 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 TOMM22Q9NS69 142 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 TBX22Q9Y458 520 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 VPS53Q5VIR6 699 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 SMAP1Q8IYB5 467 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 RPAP1Q9BWH6 1393 aaPredicted RBP15.69■□□□□ 0.1
TNFRSF21-201ENST00000296861 GRM8O00222 908 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms