RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 CHAMP1Q96JM3 812 aa12.69□□□□□ -0.38
PAPD4-201ENST00000296783 COPRSQ9NQ92 184 aa12.69□□□□□ -0.38
PAPD4-201ENST00000296783 SLAIN2Q9P270 581 aa12.69□□□□□ -0.38
PAPD4-201ENST00000296783 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
PAPD4-201ENST00000296783 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
PAPD4-201ENST00000296783 KIAA1211Q6ZU35 1233 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 ATP5J2-PTCD1G3V325 749 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 PTCD1O75127 700 aaKnown RBP12.68□□□□□ -0.38
PAPD4-201ENST00000296783 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 KCNB2Q92953 911 aa12.68□□□□□ -0.38
PAPD4-201ENST00000296783 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-201ENST00000296783 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
PAPD4-201ENST00000296783 ERBB4Q15303 1308 aa12.67□□□□□ -0.38
PAPD4-201ENST00000296783 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
PAPD4-201ENST00000296783 FAM227BQ96M60 508 aa12.67□□□□□ -0.38
PAPD4-201ENST00000296783 AK2P54819 239 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 TJP1Q07157 1748 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 A0A087WZG4 1122 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 CCDC171Q6TFL3 1326 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
PAPD4-201ENST00000296783 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
PAPD4-201ENST00000296783 TOGARAM1Q9Y4F4 1720 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 TNS2Q63HR2 1409 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 IL2RBP14784 551 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 FOXD4L5Q5VV16 416 aaPredicted RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 FOXD4L4Q8WXT5 416 aaPredicted RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 CPA1P15085 419 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 CASTP20810 708 aaKnown RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
PAPD4-201ENST00000296783 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
PAPD4-201ENST00000296783 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 HIP1O00291 1037 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 TNNI3KQ59H18 835 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 MAP4K1Q92918 833 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 FPGT-TNNI3KV9GXZ4 949 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
PAPD4-201ENST00000296783 NHSL1Q5SYE7 1610 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 H7C1W4 665 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 TFCP2Q12800 502 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 A1BGP04217 495 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 ZNF445P59923 1031 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 FOXO4P98177 505 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
PAPD4-201ENST00000296783 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
PAPD4-201ENST00000296783 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 LIMCH1Q9UPQ0 1083 aa12.64□□□□□ -0.39
PAPD4-201ENST00000296783 JCADQ9P266 1359 aa12.63□□□□□ -0.39
PAPD4-201ENST00000296783 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
PAPD4-201ENST00000296783 RBM8AQ9Y5S9 174 aaKnown RBP12.63□□□□□ -0.39
PAPD4-201ENST00000296783 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
PAPD4-201ENST00000296783 FSD1Q9BTV5 496 aa12.63□□□□□ -0.39
PAPD4-201ENST00000296783 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
PAPD4-201ENST00000296783 LARGE1O95461 756 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 ATP5JP18859 108 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 VPS53Q5VIR6 699 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 LMBR1LQ6UX01 489 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
PAPD4-201ENST00000296783 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
PAPD4-201ENST00000296783 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
PAPD4-201ENST00000296783 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-201ENST00000296783 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-201ENST00000296783 TCHHQ07283 1943 aa12.61□□□□□ -0.39
PAPD4-201ENST00000296783 NCLP19338 710 aaKnown RBP12.61□□□□□ -0.39
PAPD4-201ENST00000296783 DBNDD2Q9BQY9 259 aa12.61□□□□□ -0.39
PAPD4-201ENST00000296783 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
PAPD4-201ENST00000296783 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
PAPD4-201ENST00000296783 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
PAPD4-201ENST00000296783 WDR33Q9C0J8 1336 aaKnown RBP12.61□□□□□ -0.39
PAPD4-201ENST00000296783 SLC27A2O14975 620 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 ST3GAL1Q11201 340 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
PAPD4-201ENST00000296783 TMEM63CQ9P1W3 806 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 NDUFB9Q9Y6M9 179 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 ZKSCAN1P17029 563 aaPredicted RBP12.6□□□□□ -0.39
PAPD4-201ENST00000296783 TAF6LQ9Y6J9 622 aa12.6□□□□□ -0.39
PAPD4-201ENST00000296783 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
PAPD4-201ENST00000296783 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.59□□□□□ -0.39
PAPD4-201ENST00000296783 RFX7Q2KHR2 1363 aa12.59□□□□□ -0.39
PAPD4-201ENST00000296783 TAF5LO75529 589 aa12.59□□□□□ -0.39
PAPD4-201ENST00000296783 CHGBP05060 677 aa12.59□□□□□ -0.39
PAPD4-201ENST00000296783 EVA1CP58658 441 aa12.59□□□□□ -0.39
PAPD4-201ENST00000296783 HAUS7Q99871 368 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms