RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 RBM8AQ9Y5S9 174 aaKnown RBP17.67■□□□□ 0.42
CCT3-201ENST00000295688 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 ELP1O95163 1332 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 VPS37CA5D8V6 355 aaPredicted RBP17.66■□□□□ 0.42
CCT3-201ENST00000295688 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
CCT3-201ENST00000295688 KCNQ3O43525 872 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 ME3Q16798 604 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
CCT3-201ENST00000295688 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 LINS1Q8NG48 757 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 UTYO14607 1347 aa17.66■□□□□ 0.42
CCT3-201ENST00000295688 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.42
CCT3-201ENST00000295688 ANXA1P04083 346 aa17.64■□□□□ 0.41
CCT3-201ENST00000295688 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
CCT3-201ENST00000295688 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
CCT3-201ENST00000295688 GRM8O00222 908 aa17.63■□□□□ 0.41
CCT3-201ENST00000295688 BLOC1S2Q6QNY1 142 aa17.63■□□□□ 0.41
CCT3-201ENST00000295688 SCAND2PQ9GZW5 306 aaPredicted RBP17.63■□□□□ 0.41
CCT3-201ENST00000295688 TTC12Q9H892 705 aaPredicted RBP17.63■□□□□ 0.41
CCT3-201ENST00000295688 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
CCT3-201ENST00000295688 SLC27A2O14975 620 aa17.63■□□□□ 0.41
CCT3-201ENST00000295688 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
CCT3-201ENST00000295688 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
CCT3-201ENST00000295688 MPRIPQ6WCQ1 1025 aa17.63■□□□□ 0.41
CCT3-201ENST00000295688 PA2G4Q9UQ80 394 aaKnown RBP17.63■□□□□ 0.41
CCT3-201ENST00000295688 ZNF830Q96NB3 372 aaPredicted RBP17.62■□□□□ 0.41
CCT3-201ENST00000295688 NUP62CLQ9H1M0 184 aa17.62■□□□□ 0.41
CCT3-201ENST00000295688 TPCN1Q9ULQ1 816 aa17.62■□□□□ 0.41
CCT3-201ENST00000295688 ST3GAL1Q11201 340 aa17.62■□□□□ 0.41
CCT3-201ENST00000295688 TSGA10IPQ3SY00 556 aa17.62■□□□□ 0.41
CCT3-201ENST00000295688 FAM200AQ8TCP9 573 aa17.62■□□□□ 0.41
CCT3-201ENST00000295688 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
CCT3-201ENST00000295688 SASH1O94885 1247 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 PLCB2Q00722 1185 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 KRT32Q14532 448 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 TPRNQ4KMQ1 711 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 RGPD2P0DJD1 1756 aa17.61■□□□□ 0.41
CCT3-201ENST00000295688 RPS6KB1P23443 525 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 PSME1Q06323 249 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 EAF2Q96CJ1 260 aaPredicted RBP17.6■□□□□ 0.41
CCT3-201ENST00000295688 DDX21Q9NR30 783 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCT3-201ENST00000295688 GOLGA6L4A6NEF3 574 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 SUCLG2Q96I99 432 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 FAM227BQ96M60 508 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 FSD1Q9BTV5 496 aa17.6■□□□□ 0.41
CCT3-201ENST00000295688 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
CCT3-201ENST00000295688 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
CCT3-201ENST00000295688 FER1L4A9Z1Z3 1794 aa17.59■□□□□ 0.41
CCT3-201ENST00000295688 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
CCT3-201ENST00000295688 CWF19L2Q2TBE0 894 aaKnown RBP17.59■□□□□ 0.41
CCT3-201ENST00000295688 KIAA1524Q8TCG1 905 aa17.59■□□□□ 0.41
CCT3-201ENST00000295688 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
CCT3-201ENST00000295688 LARP1Q6PKG0 1096 aaKnown RBP17.59■□□□□ 0.41
CCT3-201ENST00000295688 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
CCT3-201ENST00000295688 JCADQ9P266 1359 aa17.58■□□□□ 0.41
CCT3-201ENST00000295688 MED23Q9ULK4 1368 aa17.58■□□□□ 0.41
CCT3-201ENST00000295688 CCDC8Q9H0W5 538 aaPredicted RBP17.58■□□□□ 0.4
CCT3-201ENST00000295688 TYRO3Q06418 890 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 CDC37L1Q7L3B6 337 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 MPNDQ8N594 471 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 ZBTB7CA1YPR0 619 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
CCT3-201ENST00000295688 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
CCT3-201ENST00000295688 KAZALD1Q96I82 304 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 TNMDQ9H2S6 317 aa17.57■□□□□ 0.4
CCT3-201ENST00000295688 SIPA1L3O60292 1781 aaPredicted RBP17.57■□□□□ 0.4
CCT3-201ENST00000295688 NPHP4O75161 1426 aaPredicted RBP17.57■□□□□ 0.4
CCT3-201ENST00000295688 CAVIN2O95810 425 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 ZNF710Q8N1W2 664 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 BOLA2Q9H3K6 86 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 MRC1P22897 1456 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 RFX7Q2KHR2 1363 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
CCT3-201ENST00000295688 AP5Z1O43299 807 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 RBM43Q6ZSC3 357 aaKnown RBP17.55■□□□□ 0.4
CCT3-201ENST00000295688 RIC3Q7Z5B4 369 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 ARHGEF25Q86VW2 580 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 DDX54Q8TDD1 881 aaKnown RBP17.55■□□□□ 0.4
CCT3-201ENST00000295688 MRVI1Q9Y6F6 885 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 LIG1P18858 919 aa17.55■□□□□ 0.4
CCT3-201ENST00000295688 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
CCT3-201ENST00000295688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.55■□□□□ 0.4
CCT3-201ENST00000295688 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
CCT3-201ENST00000295688 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
CCT3-201ENST00000295688 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
CCT3-201ENST00000295688 PXDNQ92626 1479 aa17.54■□□□□ 0.4
CCT3-201ENST00000295688 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
CCT3-201ENST00000295688 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
CCT3-201ENST00000295688 ATP5JP18859 108 aa17.53■□□□□ 0.4
CCT3-201ENST00000295688 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
CCT3-201ENST00000295688 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
CCT3-201ENST00000295688 DACT1Q9NYF0 836 aa17.53■□□□□ 0.4
CCT3-201ENST00000295688 SLIT3O75094 1523 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms